Automated Cell Nuclei Segmentation in Pleural Effusion Cytology Using Active Appearance Model. - Elif Baykal; Hulya Dogan; Murat Ekinci; Mustafa Emre Ercin; Safak Ersoz (CAIP (2), 2017)

Optimal focusing with extended depth of focus in microscopic systems. - Hulya Dogan; Elif Baykal; Murat Ekinci; Mustafa Emre Ercin; Safak Ersoz (SIU, 2017)

Automated nuclei detection in serous effusion cytology based on machine learning. - Elif Baykal; Hulya Dogan; Murat Ekinci; Mustafa Emre Ercin; Safak Ersoz (SIU, 2017)

Automated nuclei detection in serous effusion cytology with stacked sparse autoencoders. - Elif Baykal; Hulya Dogan; Mustafa Emre Ercin; Safak Ersoz; Murat Ekinci (SIU, 2018)

3D panoramic imaging for cytopatological analysis in light microscopic system. - Hulya Dogan; Elif Baykal; Mustafa Emre Ercin; Safak Ersoz; Murat Ekinci (SIU, 2018)

An ensemble of fine-tuned fully convolutional neural networks for pleural effusion cell nuclei segmentation. - Elif Baykal Kablan; Hulya Dogan; Mustafa Emre Ercin; Safak Ersoz; Murat Ekinci (Comput. Electr. Eng., 2020)

Modern convolutional object detectors for nuclei detection on pleural effusion cytology images. - Elif Baykal; Hulya Dogan; Mustafa Emre Ercin; Safak Ersoz; Murat Ekinci (Multim. Tools Appl., 2020)

Transfer learning with pre-trained deep convolutional neural networks for serous cell classification. - Elif Baykal; Hulya Dogan; Mustafa Emre Ercin; Safak Ersoz; Murat Ekinci (Multim. Tools Appl., 2020)

A hybrid technique using modified ICP algorithm for faster and automatic 2D & 3D microscopic image stitching in cytopathologic examination. - Hulya Dogan; Elif Baykal Kablan; Murat Ekinci; Mustafa Emre Ercin; Safak Ersoz (Turkish J. Electr. Eng. Comput. Sci., 2021)

Combining structural equation modeling analysis with machine learning for early malignancy detection in Bethesda Category III thyroid nodules. - Zeliha Aydin Kasap; Burçin Kurt; Ali Güner; Elif Özsagir; Mustafa Emre Ercin (Artif. Intell. Medicine, 2025)