PUMA2 - grid-based high-throughput analysis of genomes and metabolic pathways. - Natalia Maltsev; Elizabeth M. Glass; Dinanath Sulakhe; Alexis A. Rodriguez; Mustafa H. Syed; Tanuja Bompada; Yi Zhang 002; Mark D'Souza (Nucleic Acids Res., 2006)

Evolutionary analysis of enzymes using Chisel. - Alexis A. Rodriguez; Tanuja Bompada; Mustafa H. Syed; Parantu K. Shah; Natalia Maltsev (Bioinform., 2007)

Sentra: a database of signal transduction proteins for comparative genome analysis. - Mark D'Souza; Elizabeth M. Glass; Mustafa H. Syed; Yi Zhang 002; Alexis A. Rodriguez; Natalia Maltsev; Michael Y. Galperin (Nucleic Acids Res., 2007)

Shewanella knowledgebase: integration of the experimental data and computational predictions suggests a biological role for transcription of intergenic regions. - Tatiana V. Karpinets; Margaret F. Romine; Denise Schmoyer; Guruprasad Kora; Mustafa H. Syed; Michael R. Leuze; Margrethe H. Serres; Byung-Hoon Park; Nagiza F. Samatova; Edward C. Uberbacher (Database J. Biol. Databases Curation, 2010)

BESC knowledgebase public portal. - Mustafa H. Syed; Tatiana V. Karpinets; Morey Parang; Michael R. Leuze; Byung-Hoon Park; Doug Hyatt; Steven D. Brown; Steve Moulton; Michael D. Galloway; Edward C. Uberbacher (Bioinform., 2012)