Combining State-Based and Scenario-Based Approaches in Modeling Biological Systems. - Jasmin Fisher; David Harel; E. Jane Albert Hubbard; Nir Piterman; Michael J. Stern; Naamah Swerdlin (CMSB, 2004)

Concurrency in Biological Modeling: Behavior, Execution and Visualization. - David Harel; Yaki Setty; Sol Efroni; Naamah Swerdlin; Irun R. Cohen (FBTC@CONCUR, 2007)

The Lymph Node B Cell Immune Response: Dynamic Analysis In-Silico. - Naamah Swerdlin; Irun R. Cohen; David Harel (Proc. IEEE, 2008)