A fast pattern matching algorithm for highly similar sequences. - Nadia Ben Nsira; Thierry Lecroq; Mourad Elloumi (BIBM, 2014)

A fast Boyer-Moore type pattern matching algorithm for highly similar sequences. - Nadia Ben Nsira; Thierry Lecroq; Mourad Elloumi (Int. J. Data Min. Bioinform., 2015)

Algorithms for Indexing Highly Similar DNA Sequences. - Nadia Ben Nsira; Thierry Lecroq; Mourad Elloumi (Algorithms for Next-Generation Sequencing Data, 2017)

On-line String Matching in Highly Similar DNA Sequences. - Nadia Ben Nsira; Mourad Elloumi; Thierry Lecroq (Math. Comput. Sci., 2017)

Algorithme de recherche incrémentale d'un motif dans un ensemble de séquences d'ADN issues de séquençages à haut débit. (Algorithms of on-line pattern matching in a set of highly sequences outcoming from next sequencing generation). - Nadia Ben Nsira (2017)

Practical fast on-line exact pattern matching algorithms for highly similar sequences. - Nadia Ben Nsira; Thierry Lecroq; Élise Prieur-Gaston (BIBM, 2018)

Fast practical online exact single and multiple pattern matching algorithms in highly similar sequences. - Nadia Ben Nsira; Thierry Lecroq; Élise Prieur-Gaston (Int. J. Data Min. Bioinform., 2019)