A new efficient algorithm for inferring explicit hybridization networks following the Neighbor-Joining principle. - Matthieu Willems; Nadia Tahiri; Vladimir Makarenkov (J. Bioinform. Comput. Biol., 2014)

An intelligent shopping list based on the application of partitioning and machine learning algorithms. - Nadia Tahiri; Bogdan Mazoure; Vladimir Makarenkov (SciPy, 2019)

DoubleRecViz: a web-based tool for visualizing transcript-gene-species tree reconciliation. - Esaie Kuitche; Yanchun Qi; Nadia Tahiri; Jack Parmer; Aïda Ouangraoua (Bioinform., 2021)

Phylogeography: Analysis of genetic and climatic data of SARS-CoV-2. - Aleksandr Koshkarov; Wanlin Li; My-Linh Luu; Nadia Tahiri (SciPy, 2022)

Building alternative consensus trees and supertrees using k-means and Robinson and Foulds distance. - Nadia Tahiri; Bernard Fichet; Vladimir Makarenkov (Bioinform., 2022)

Invariant transformers of Robinson and Foulds distance matrices for Convolutional Neural Network. - Nadia Tahiri; Andrey Veriga; Aleksandr Koshkarov; Boris Morozov (J. Bioinform. Comput. Biol., 2022)

GPTree: Generator of Phylogenetic Trees with Overlapping and Biological Events for Supertree Inference. - Aleksandr Koshkarov; Nadia Tahiri (BIOINFORMATICS, 2023)

A new machine learning workflow to create an optimal waiting list in hospitals. - Mouhamadou Moustapha Mbaye; Fadi M. H. Abu Salem; Nadia Tahiri (ICMHI, 2023)

Inferring multiple consensus trees and supertrees using clustering: a review. - Vladimir Makarenkov; Gayane S. Barseghyan; Nadia Tahiri (CoRR, 2023)

Finding Maximum Common Contractions Between Phylogenetic Networks. - Bertrand Marchand; Nadia Tahiri; Olivier Tremblay Savard; Manuel Lafond (WABI, 2024)

Novel Algorithm for Comparing Phylogenetic Trees with Different but Overlapping Taxa. - Aleksandr Koshkarov; Nadia Tahiri (Symmetry, 2024)

New generalized metric based on branch length distance to compare B cell lineage trees. - Mahsa Farnia; Nadia Tahiri (Algorithms Mol. Biol., 2024)