The Generation of Promoter-Mediated Transcriptional Noise in Bacteria. - Namiko Mitarai; Ian B. Dodd; Michael T. Crooks; Kim Sneppen (PLoS Comput. Biol., 2008)

Information spreading and development of cultural centers - Bartlomiej Dybiec; Namiko Mitarai; Kim Sneppen (CoRR, 2012)

Conditional Cooperativity of Toxin - Antitoxin Regulation Can Mediate Bistability between Growth and Dormancy. - Ilaria Cataudella; Kim Sneppen; Kenn Gerdes; Namiko Mitarai (PLoS Comput. Biol., 2013)

Food Web Assembly Rules for Generalized Lotka-Volterra Equations. - Jan O. Haerter; Namiko Mitarai; Kim Sneppen (PLoS Comput. Biol., 2016)

When to wake up? The optimal waking-up strategies for starvation-induced persistence. - Yusuke Himeoka; Namiko Mitarai (PLoS Comput. Biol., 2021)

From kill the winner to eliminate the winner in open phage-bacteria systems. - Anastasios Marantos; Namiko Mitarai; Kim Sneppen (PLoS Comput. Biol., 2022)

Competitive advantages of T-even phage lysis inhibition in response to secondary infection. - Ulrik Hvid; Namiko Mitarai (PLoS Comput. Biol., 2024)