Gene Co-Adaboost: a semi-supervised approach for classifying gene expression data. - Nan Du 001; Kang Li 003; Supriya D. Mahajan; Stanley A. Schwartz; Bindukumar B. Nair; Chiu Bin Hsiao; Aidong Zhang (BCB, 2011)

Finding Informative Genes from Multiple Microarray Experiments: A Graph-based Consensus Maximization Model. - Liang Ge; Nan Du 001; Aidong Zhang (BIBM, 2011)

Evolutionary analysis of functional modules in dynamic PPI networks. - Nan Du 001; Yuan Zhang 030; Kang Li 003; Jing Gao 004; Supriya D. Mahajan; Bindukumar B. Nair; Stanley A. Schwartz; Aidong Zhang (BCB, 2012)

Finding informative genes for prostate cancer: a general framework of integrating heterogeneous sources. - Liang Ge; Jing Gao 004; Nan Du 001; Aidong Zhang (BCB, 2012)

Detecting ECG abnormalities via transductive transfer learning. - Kang Li 003; Nan Du 001; Aidong Zhang (BCB, 2012)

A collective NMF method for detecting protein functional module from multiple data sources. - Yuan Zhang 030; Nan Du 001; Liang Ge; Kebin Jia; Aidong Zhang (BCB, 2012)

A graph-based cluster ensemble method to detect protein functional modules from multiple information sources. - Yuan Zhang 030; Liang Ge; Nan Du 001; Guoqiang Fan; Kebin Jia; Aidong Zhang (BCB, 2012)

De-noise biological network from heterogeneous sources via link propagation. - Nan Du 001; Jing Gao 004; Vishrawas Gopalakrishnan; Aidong Zhang (BIBM, 2012)

A link prediction based unsupervised rank aggregation algorithm for informative gene selection. - Kang Li 003; Nan Du 001; Aidong Zhang (BIBM, 2012)

A Framework for Identifying Affinity Classes of Inorganic Materials Binding Peptide Sequences. - Nan Du 001; Marc R. Knecht; Paras N. Prasad; Mark T. Swihart; Tiffany R. Walsh; Aidong Zhang (BCB, 2013)

Detecting mutual functional gene clusters from multiple related diseases. - Nan Du 001; Xiaoyi Li; Yuan Zhang 030; Aidong Zhang (BIBM, 2013)

Critical protein detection in dynamic PPI networks with multi-source integrated deep belief nets. - Yuan Zhang 030; Nan Du 001; Kang Li 003; Jinchao Feng; Kebin Jia; Aidong Zhang (BIBM, 2013)

Progression Analysis of Community Strengths in Dynamic Networks. - Nan Du 001; Jing Gao 004; Aidong Zhang (ICDM, 2013)

Learning, Analyzing and Predicting Object Roles on Dynamic Networks. - Kang Li 003; Suxin Guo; Nan Du 001; Jing Gao 004; Aidong Zhang (ICDM, 2013)

Analysis on Community Variational Trend in Dynamic Networks. - Xiaowei Jia; Nan Du 001; Jing Gao 004; Aidong Zhang (CIKM, 2014)

LRBM: A Restricted Boltzmann Machine Based Approach for Representation Learning on Linked Data. - Kang Li 003; Jing Gao 004; Suxin Guo; Nan Du 001; Xiaoyi Li; Aidong Zhang (ICDM, 2014)

A Deep Learning Approach to Link Prediction in Dynamic Networks. - Xiaoyi Li; Nan Du 001; Hui Li; Kang Li 003; Jing Gao 004; Aidong Zhang (SDM, 2014)

Significant Edge Detection in Target Network by Exploring Multiple Auxiliary Networks. - Nan Du 001; Jing Gao 004; Liang Ge; Vishrawas Gopalakrishnan; Xiaowei Jia; Kang Li 003; Aidong Zhang (ASONAM, 2015)

Random Decision Hashing for Massive Data Learning. - Xiatian Zhang; Wei Fan 001; Nan Du 001 (BigMine, 2015)

Functional Node Detection on Linked Data. - Kang Li 003; Jing Gao 004; Suxin Guo; Nan Du 001; Aidong Zhang (SDM, 2015)

A graph-based integrative method of detecting consistent protein functional modules from multiple data sources. - Yuan Zhang 030; Yue Cheng; Liang Ge; Nan Du 001; Kebin Jia; Aidong Zhang (Int. J. Data Min. Bioinform., 2015)

Identifying Affinity Classes of Inorganic Materials Binding Sequences via a Graph-Based Model. - Nan Du 001; Marc R. Knecht; Mark T. Swihart; Zhenghua Tang; Tiffany R. Walsh; Aidong Zhang (IEEE ACM Trans. Comput. Biol. Bioinform., 2015)

Tracking Temporal Community Strength in Dynamic Networks. - Nan Du 001; Xiaowei Jia; Jing Gao 004; Vishrawas Gopalakrishnan; Aidong Zhang (IEEE Trans. Knowl. Data Eng., 2015)

Influence based analysis of community consistency in dynamic networks. - Xiaowei Jia; Xiaoyi Li; Nan Du 001; Yuan Zhang 028; Vishrawas Gopalakrishnan; Guangxu Xun; Aidong Zhang (ASONAM, 2016)

Augmented LSTM Framework to Construct Medical Self-Diagnosis Android. - Chaochun Liu; Huan Sun 001; Nan Du 001; Shulong Tan; Hongliang Fei; Wei Fan 001; Tao Yang 012; Hao Wu; Yaliang Li; Chenwei Zhang (ICDM, 2016)

Mining User Intentions from Medical Queries: A Neural Network Based Heterogeneous Jointly Modeling Approach. - Chenwei Zhang; Wei Fan 001; Nan Du 001; Philip S. Yu (WWW, 2016)

Variational hybridization and transformation for large inaccurate noisy-or networks. - Yusheng Xie; Nan Du 001; Wei Fan 001; Jing Zhai; Weicheng Zhu (CoRR, 2016)

Bringing semantic structures to user intent detection in online medical queries. - Chenwei Zhang; Nan Du 001; Wei Fan 001; Yaliang Li; Chun-Ta Lu; Philip S. Yu (IEEE BigData, 2017)

Reliable Medical Diagnosis from Crowdsourcing: Discover Trustworthy Answers from Non-Experts. - Yaliang Li; Nan Du 001; Chaochun Liu; Yusheng Xie; Wei Fan 001; Qi Li 012; Jing Gao 004; Huan Sun 001 (WSDM, 2017)

Drug2Vec: Knowledge-aware Feature-driven Method for Drug Representation Learning. - Ying Shen 001; Kaiqi Yuan; Yaliang Li; Buzhou Tang; Min Yang 007; Nan Du 001; Kai Lei (BIBM, 2018)

Knowledge as A Bridge: Improving Cross-domain Answer Selection with External Knowledge. - Yang Deng 002; Ying Shen 001; Min Yang 007; Yaliang Li; Nan Du 001; Wei Fan 001; Kai Lei (COLING, 2018)

Cooperative Denoising for Distantly Supervised Relation Extraction. - Kai Lei; Daoyuan Chen; Yaliang Li; Nan Du 001; Min Yang 007; Wei Fan 001; Ying Shen 001 (COLING, 2018)

IDDAT: An Ontology-Driven Decision Support System for Infectious Disease Diagnosis and Therapy. - Ying Shen 001; Yang Deng 002; Jin Zhang; Yaliang Li; Nan Du 001; Wei Fan 001; Min Yang 007; Kai Lei (ICDM Workshops, 2018)

MuVAN: A Multi-view Attention Network for Multivariate Temporal Data. - Ye Yuan 006; Guangxu Xun; Fenglong Ma; Yaqing Wang 001; Nan Du 001; Kebin Jia; Lu Su 001; Aidong Zhang (ICDM, 2018)

On the Generative Discovery of Structured Medical Knowledge. - Chenwei Zhang; Yaliang Li; Nan Du 001; Wei Fan 001; Philip S. Yu (KDD, 2018)

Ontology Evaluation with Path-based Text-aware Entropy Computation. - Ying Shen 001; Daoyuan Chen; Min Yang 007; Yaliang Li; Nan Du 001; Kai Lei (SIGIR, 2018)

Knowledge-aware Attentive Neural Network for Ranking Question Answer Pairs. - Ying Shen 001; Yang Deng 002; Min Yang 007; Yaliang Li; Nan Du 001; Wei Fan 001; Kai Lei (SIGIR, 2018)

AnatomyNet: Deep 3D Squeeze-and-excitation U-Nets for fast and fully automated whole-volume anatomical segmentation. - Wentao Zhu 001; Yufang Huang; Hui Tang; Zhen Qian; Nan Du 001; Wei Fan 001; Xiaohui Xie (CoRR, 2018)

When Truth Discovery Meets Medical Knowledge Graph: Estimating Trustworthiness Degree for Medical Knowledge Condition. - Yang Deng 002; Yaliang Li; Nan Du 001; Wei Fan 001; Ying Shen 001; Kai Lei (CoRR, 2018)

Finding Similar Medical Questions from Question Answering Websites. - Yaliang Li; Liuyi Yao; Nan Du 001; Jing Gao 004; Qi Li 012; Chuishi Meng; Chenwei Zhang; Wei Fan 001 (CoRR, 2018)

Multi-Task Learning with Multi-View Attention for Answer Selection and Knowledge Base Question Answering. - Yang Deng 002; Yuexiang Xie; Yaliang Li; Min Yang 007; Nan Du 001; Wei Fan 001; Kai Lei; Ying Shen 001 (AAAI, 2019)

Multi-grained Named Entity Recognition. - Congying Xia; Chenwei Zhang; Tao Yang 012; Yaliang Li; Nan Du 001; Xian Wu 001; Wei Fan 001; Fenglong Ma; Philip S. Yu (ACL (1), 2019)

Joint Slot Filling and Intent Detection via Capsule Neural Networks. - Chenwei Zhang; Yaliang Li; Nan Du 001; Wei Fan 001; Philip S. Yu (ACL (1), 2019)

MedTruth: A Semi-supervised Approach to Discovering Knowledge Condition Information from Multi-Source Medical Data. - Yang Deng 002; Yaliang Li; Ying Shen 001; Nan Du 001; Wei Fan 001; Min Yang 007; Kai Lei (CIKM, 2019)

Path-based Attribute-aware Representation Learning for Relation Prediction. - Ying Shen 001; Desi Wen; Yaliang Li; Nan Du 001; Haitao Zheng 002; Min Yang 007 (SDM, 2019)

MCVAE: Margin-based Conditional Variational Autoencoder for Relation Classification and Pattern Generation. - Fenglong Ma; Yaliang Li; Chenwei Zhang; Jing Gao 004; Nan Du 001; Wei Fan 001 (WWW, 2019)

SynonymNet: Multi-context Bilateral Matching for Entity Synonyms. - Chenwei Zhang; Yaliang Li; Nan Du 001; Wei Fan 001; Philip S. Yu (CoRR, 2019)

KMR: knowledge-oriented medicine representation learning for drug-drug interaction and similarity computation. - Ying Shen 001; Kaiqi Yuan; Min Yang 007; Buzhou Tang; Yaliang Li; Nan Du 001; Kai Lei (J. Cheminformatics, 2019)

On the Generation of Medical Question-Answer Pairs. - Sheng Shen 001; Yaliang Li; Nan Du 001; Xian Wu 001; Yusheng Xie; Shen Ge; Tao Yang 012; Kai Wang; Xingzheng Liang; Wei Fan 001 (AAAI, 2020)

Entity Synonym Discovery via Multipiece Bilateral Context Matching. - Chenwei Zhang; Yaliang Li; Nan Du 001; Wei Fan 001; Philip S. Yu (IJCAI, 2020)

Extracting Medical Knowledge from Crowdsourced Question Answering Website. - Yaliang Li; Chaochun Liu; Nan Du 001; Wei Fan 001; Qi Li 012; Jing Gao 004; Chenwei Zhang; Hao Wu (IEEE Trans. Big Data, 2020)

Knowledge-Guided Efficient Representation Learning for Biomedical Domain. - Kishlay Jha; Guangxu Xun; Nan Du 001; Aidong Zhang (KDD, 2021)

Practical fine-grained learning based anomaly classification for ECG image. - Qing Cao; Nan Du 001; Li Yu; Ming Zuo; Jingsheng Lin; Nathan Liu; Erheng Zhong; Zizhu Liu; Qiaoran Chen; Ying Shen 001; Kang Chen (Artif. Intell. Medicine, 2021)

FM-ECG: A fine-grained multi-label framework for ECG image classification. - Nan Du 001; Qing Cao; Li Yu; Nathan Liu; Erheng Zhong; Zizhu Liu; Ying Shen 001; Kang Chen (Inf. Sci., 2021)

Tracking Community Consistency in Dynamic Networks: An Influence-Based Approach. - Xiaowei Jia; Xiaoyi Li; Nan Du 001; Yuan Zhang 028; Vishrawas Gopalakrishnan; Guangxu Xun; Aidong Zhang (IEEE Trans. Knowl. Data Eng., 2021)

Modeling path information for knowledge graph completion. - Ying Shen 001; Dagang Li 001; Nan Du 001 (Neural Comput. Appl., 2022)

FIT-graph: A multi-grained evolutionary graph based framework for disease diagnosis. - Zizhu Liu; Qing Cao; Nan Du 001; Huizhen Shu; Erheng Zhong; Nan Jiang; Qiaoran Chen; Ying Shen 001; Kang Chen (Artif. Intell. Medicine, 2024)