Rcpi: R/Bioconductor package to generate various descriptors of proteins, compounds and their interactions. - Dong-Sheng Cao 001; Nan Xiao 002; Qing-Song Xu; Alex F. Chen (Bioinform., 2015)

protr/ProtrWeb: R package and web server for generating various numerical representation schemes of protein sequences. - Nan Xiao 002; Dong-Sheng Cao 001; Min-Feng Zhu; Qing-Song Xu (Bioinform., 2015)

dml: Distance Metric Learning in R. - Yuan (Terry) Tang; Tao Gao; Nan Xiao 002 (J. Open Source Softw., 2018)

The Rockerverse: Packages and Applications for Containerization with R. - Daniel Nüst; Dirk Eddelbuettel; Dom Bennett; Robrecht Cannoodt; Dav Clark; Gergely Daroczi; Mark Edmondson; Colin Fay; Ellis Hughes; Sean Lopp; Ben Marwick; Heather Nolis; et al. (CoRR, 2020)

BCO App: tools for generating BioCompute Objects from next-generation sequencing workflows and computations. - Nan Xiao 002; Soner Koc; David Roberson; Phillip Brooks; Manisha Ray; Dennis A. Dean (F1000Research, 2020)

The Rockerverse: Packages and Applications for Containerisation with R. - Daniel Nüst; Dirk Eddelbuettel; Dom Bennett; Robrecht Cannoodt; Dav Clark; Gergely Daroczi; Mark Edmondson; Colin Fay; Ellis Hughes; Lars Kjeldgaard; Sean Lopp; Ben Marwick; et al. (R J., 2020)

Bioinformatics tools developed to support BioCompute Objects. - Janisha A. Patel; Dennis A. Dean; Charles Hadley King; Nan Xiao 002; Soner Koc; Ekaterina Minina; Anton Golikov; Phillip Brooks; Robel Y. Kahsay; Rahi Navelkar; Manisha Ray; Dave Roberson; et al. (Database J. Biol. Databases Curation, 2021)