Joint estimation of DNA copy number from multiple platforms. - Nancy Ruonan Zhang; Yasin Senbabaoglu; Jun Z. Li (Bioinform., 2010)

Importance Sampling of Word Patterns in DNA and Protein Sequences. - Hock Peng Chan; Nancy Ruonan Zhang; Louis H. Y. Chen (J. Comput. Biol., 2010)

Estimation of Parent Specific DNA Copy Number in Tumors using High-Density Genotyping Arrays. - Hao Chen 064; Haipeng Xing; Nancy Ruonan Zhang (PLoS Comput. Biol., 2011)

Global copy number profiling of cancer genomes. - Xuefeng Wang; Mengjie Chen; Xiaoqing Yu; Natapol Pornputtapong; Hao Chen 064; Nancy Ruonan Zhang; R. Scott Powers; Michael Krauthammer (Bioinform., 2016)

DNA copy number profiling using single-cell sequencing. - Xuefeng Wang; Hao Chen 064; Nancy Ruonan Zhang (Briefings Bioinform., 2018)

Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny. - Eugene Urrutia; Hao Chen 064; Zilu Zhou; Nancy Ruonan Zhang; Yuchao Jiang (Bioinform., 2018)

Integrative DNA copy number detection and genotyping from sequencing and array-based platforms. - Zilu Zhou; Weixin Wang 004; Li-San Wang; Nancy Ruonan Zhang (Bioinform., 2018)

Online Single-cell RNA-seq Data Denoising with Transfer Learning. - Bowei Kang; Eroma Abeysinghe; Divyansh Agarwal; Quanli Wang; Sudhakar Pamidighantam; Mo Huang; Nancy Ruonan Zhang; Jingshu Wang (PEARC, 2020)