msBayes: Pipeline for testing comparative phylogeographic histories using hierarchical approximate Bayesian computation. - Michael J. Hickerson; Eli Stahl; Naoki Takebayashi (BMC Bioinform., 2007)

MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity. - Wen Huang; Naoki Takebayashi; Yan Qi; Michael J. Hickerson (BMC Bioinform., 2011)