Redundant interactions in protein rigid cluster analysis. - Naomi Fox; Ileana Streinu (ICCABS, 2011)

KINARI-Web: a server for protein rigidity analysis. - Naomi Fox; Filip Jagodzinski; Yang Li 104; Ileana Streinu (Nucleic Acids Res., 2011)

Towards accurate modeling for protein rigidity analysis. - Naomi Fox; Ileana Streinu (ICCABS, 2012)

Towards accurate modeling of noncovalent interactions for protein rigidity analysis. - Naomi Fox; Ileana Streinu (BMC Bioinform., 2013)

SCOPe: Structural Classification of Proteins - extended, integrating SCOP and ASTRAL data and classification of new structures. - Naomi K. Fox; Steven E. Brenner; John-Marc Chandonia (Nucleic Acids Res., 2014)

Redundant and Critical Noncovalent Interactions in Protein Rigid Cluster Analysis. - Naomi Fox; Ileana Streinu (Discrete and Topological Models in Molecular Biology, 2014)

SCOPe: classification of large macromolecular structures in the structural classification of proteins - extended database. - John-Marc Chandonia; Naomi K. Fox; Steven E. Brenner (Nucleic Acids Res., 2019)

SCOPe: improvements to the structural classification of proteins - extended database to facilitate variant interpretation and machine learning. - John-Marc Chandonia; Lindsey Guan; Shiangyi Lin; Changhua Yu; Naomi K. Fox; Steven E. Brenner (Nucleic Acids Res., 2022)