Making Wide-Area, Multi-site MPI Feasible Using Xen VM. - Masaki Tatezono; Naoya Maruyama; Satoshi Matsuoka (ISPA Workshops, 2006)

Scalable systems software - Problem diagnosis in large-scale computing environments. - Alexander V. Mirgorodskiy; Naoya Maruyama; Barton P. Miller (SC, 2006)

Virtual Clusters on the Fly - Fast, Scalable, and Flexible Installation. - Hideo Nishimura; Naoya Maruyama; Satoshi Matsuoka (CCGRID, 2007)

Model-based resource selection for efficient virtual cluster deployment. - Shohei Yamasaki; Naoya Maruyama; Satoshi Matsuoka (VTDC@SC, 2007)

Access-pattern and bandwidth aware file replication algorithm in a grid environment. - Hitoshi Sato; Satoshi Matsuoka; Toshio Endo; Naoya Maruyama (GRID, 2008)

Model-based fault localization in large-scale computing systems. - Naoya Maruyama; Satoshi Matsuoka (IPDPS, 2008)

An efficient, model-based CPU-GPU heterogeneous FFT library. - Yasuhiko Ogata; Toshio Endo; Naoya Maruyama; Satoshi Matsuoka (IPDPS, 2008)

Adaptive Resource Indexing Technique for Unstructured Peer-to-Peer Networks. - Sumeth Lerthirunwong; Naoya Maruyama; Satoshi Matsuoka (CCGRID, 2009)

Distributed Diskless Checkpoint for Large Scale Systems. - Leonardo Arturo Bautista-Gomez; Naoya Maruyama; Franck Cappello; Satoshi Matsuoka (CCGRID, 2010)

Statistical power modeling of GPU kernels using performance counters. - Hitoshi Nagasaka; Naoya Maruyama; Akira Nukada; Toshio Endo; Satoshi Matsuoka (Green Computing Conference, 2010)

Low-overhead diskless checkpoint for hybrid computing systems. - Leonardo Arturo Bautista-Gomez; Akira Nukada; Naoya Maruyama; Franck Cappello; Satoshi Matsuoka (HiPC, 2010)

Linpack evaluation on a supercomputer with heterogeneous accelerators. - Toshio Endo; Akira Nukada; Satoshi Matsuoka; Naoya Maruyama (IPDPS, 2010)

A high-performance fault-tolerant software framework for memory on commodity GPUs. - Naoya Maruyama; Akira Nukada; Satoshi Matsuoka (IPDPS, 2010)

An 80-Fold Speedup, 15.0 TFlops Full GPU Acceleration of Non-Hydrostatic Weather Model ASUCA Production Code. - Takashi Shimokawabe; Takayuki Aoki; Chiashi Muroi; Junichi Ishida; Kohei Kawano; Toshio Endo; Akira Nukada; Naoya Maruyama; Satoshi Matsuoka (SC, 2010)

Model-based Fault Localization: Finding Behavioral Outliers in Large-scale Computing Systems. - Naoya Maruyama; Satoshi Matsuoka (New Gener. Comput., 2010)

FTI: high performance fault tolerance interface for hybrid systems. - Leonardo Arturo Bautista-Gomez; Seiji Tsuboi; Dimitri Komatitsch; Franck Cappello; Naoya Maruyama; Satoshi Matsuoka (SC, 2011)

Poster: fast GPU read alignment with burrows wheeler transform based index. - Aleksandr Drozd; Naoya Maruyama; Satoshi Matsuoka (SC Companion, 2011)

Physis: an implicitly parallel programming model for stencil computations on large-scale GPU-accelerated supercomputers. - Naoya Maruyama; Tatsuo Nomura; Kento Sato; Satoshi Matsuoka (SC, 2011)

Peta-scale phase-field simulation for dendritic solidification on the TSUBAME 2.0 supercomputer. - Takashi Shimokawabe; Takayuki Aoki; Tomohiro Takaki; Toshio Endo; Akinori Yamanaka; Naoya Maruyama; Akira Nukada; Satoshi Matsuoka (SC, 2011)

An exact algorithm for energy-efficient acceleration of task trees on CPU/GPU architectures. - Mark Silberstein; Naoya Maruyama (SYSTOR, 2011)

Design and Implementation of Portable and Efficient Non-blocking Collective Communication. - Akihiro Nomura 002; Yutaka Ishikawa; Naoya Maruyama; Satoshi Matsuoka (CCGRID, 2012)

Hierarchical Clustering Strategies for Fault Tolerance in Large Scale HPC Systems. - Leonardo Arturo Bautista-Gomez; Thomas Ropars; Naoya Maruyama; Franck Cappello; Satoshi Matsuoka (CLUSTER, 2012)

Scalable Reed-Solomon-Based Reliable Local Storage for HPC Applications on IaaS Clouds. - Leonardo Arturo Bautista-Gomez; Bogdan Nicolae; Naoya Maruyama; Franck Cappello; Satoshi Matsuoka (Euro-Par, 2012)

Multi-GPU Implementation of the NICAM Atmospheric Model. - Irina Demeshko; Naoya Maruyama; Hirofumi Tomita; Satoshi Matsuoka (Euro-Par Workshops, 2012)

Sequence Alignment on Massively Parallel Heterogeneous Systems. - Aleksandr Drozd; Naoya Maruyama; Satoshi Matsuoka (IPDPS Workshops, 2012)

Design and modeling of a non-blocking checkpointing system. - Kento Sato; Naoya Maruyama; Kathryn M. Mohror; Adam Moody; Todd Gamblin; Bronis R. de Supinski; Satoshi Matsuoka (SC, 2012)

A Task Parallel Implementation of Fast Multipole Methods. - Kenjiro Taura; Jun Nakashima; Rio Yokota; Naoya Maruyama (SC Companion, 2012)

A Multi GPU Read Alignment Algorithm with Model-Based Performance Optimization. - Aleksandr Drozd; Naoya Maruyama; Satoshi Matsuoka (VECPAR, 2012)

CUDA vs OpenACC: Performance Case Studies with Kernel Benchmarks and a Memory-Bound CFD Application. - Tetsuya Hoshino; Naoya Maruyama; Satoshi Matsuoka; Ryoji Takaki (CCGRID, 2013)

K MapReduce: A scalable tool for data-processing and search/ensemble applications on large-scale supercomputers. - Motohiko Matsuda; Naoya Maruyama; Shin'ichiro Takizawa (CLUSTER, 2013)

Highly optimized full GPU-acceleration of non-hydrostatic weather model SCALE-LES. - Mohamed Wahib; Naoya Maruyama (CLUSTER, 2013)

Topic 15: GPU and Accelerator Computing - (Introduction). - Naoya Maruyama; Leif Kobbelt; Pavan Balaji; Nikola Puzovic; Samuel Thibault; Kun Zhou (Euro-Par, 2013)

Integrating Multi-GPU Execution in an OpenACC Compiler. - Toshiya Komoda; Shinobu Miwa; Hiroshi Nakamura; Naoya Maruyama (ICPP, 2013)

Improving the Computing Efficiency of HPC Systems Using a Combination of Proactive and Preventive Checkpointing. - Mohamed-Slim Bouguerra; Ana Gainaru; Leonardo Arturo Bautista-Gomez; Franck Cappello; Satoshi Matsuoka; Naoya Maruyama (IPDPS, 2013)

Fork-Join and Data-Driven Execution Models on Multi-core Architectures: Case Study of the FMM. - Abdelhalim Amer; Naoya Maruyama; Miquel Pericàs; Kenjiro Taura; Rio Yokota; Satoshi Matsuoka (ISC, 2013)

A User-Level InfiniBand-Based File System and Checkpoint Strategy for Burst Buffers. - Kento Sato; Kathryn M. Mohror; Adam Moody; Todd Gamblin; Bronis R. de Supinski; Naoya Maruyama; Satoshi Matsuoka (CCGRID, 2014)

FMI: Fault Tolerant Messaging Interface for Fast and Transparent Recovery. - Kento Sato; Adam Moody; Kathryn M. Mohror; Todd Gamblin; Bronis R. de Supinski; Naoya Maruyama; Satoshi Matsuoka (IPDPS, 2014)

Evaluation of Asynchronous MPI Communication in Map-Reduce System on the K Computer. - Motohiko Matsuda; Shin'ichiro Takizawa; Naoya Maruyama (EuroMPI/ASIA, 2014)

An OpenACC extension for data layout transformation. - Tetsuya Hoshino; Naoya Maruyama; Satoshi Matsuoka (WACCPD@SC, 2014)

Scalable Kernel Fusion for Memory-Bound GPU Applications. - Mohamed Wahib; Naoya Maruyama (SC, 2014)

Automated GPU Kernel Transformations in Large-Scale Production Stencil Applications. - Mohamed Wahib; Naoya Maruyama (HPDC, 2015)

PDSEC Keynote. - Naoya Maruyama (IPDPS Workshops, 2015)

Data-centric GPU-based adaptive mesh refinement. - Mohamed Wahib; Naoya Maruyama (IA3@SC, 2015)

Extreme scale breadth-first search on supercomputers. - Koji Ueno; Toyotaro Suzumura; Naoya Maruyama; Katsuki Fujisawa; Satoshi Matsuoka (IEEE BigData, 2016)

From FLOPS to BYTES: disruptive change in high-performance computing towards the post-moore era. - Satoshi Matsuoka; Hideharu Amano; Kengo Nakajima; Koji Inoue; Tomohiro Kudoh; Naoya Maruyama; Kenjiro Taura; Takeshi Iwashita; Takahiro Katagiri; Toshihiro Hanawa; Toshio Endo (Conf. Computing Frontiers, 2016)

A Directive-Based Data Layout Abstraction for Performance Portability of OpenACC Applications. - Tetsuya Hoshino; Naoya Maruyama; Satoshi Matsuoka (HPCC/SmartCity/DSS, 2016)

Tapas: An Implicitly Parallel Programming Framework for Hierarchical N-Body Algorithms. - Keisuke Fukuda; Motohiko Matsuda; Naoya Maruyama; Rio Yokota; Kenjiro Taura; Satoshi Matsuoka (ICPADS, 2016)

Scaling FMM with Data-Driven OpenMP Tasks on Multicore Architectures. - Abdelhalim Amer; Satoshi Matsuoka; Miquel Pericàs; Naoya Maruyama; Kenjiro Taura; Rio Yokota; Pavan Balaji (IWOMP, 2016)

Daino: a high-level framework for parallel and efficient AMR on GPUs. - Mohamed Wahib; Naoya Maruyama; Takayuki Aoki (SC, 2016)

Evaluating and optimizing OpenCL kernels for high performance computing with FPGAs. - Hamid Reza Zohouri; Naoya Maruyama; Aaron Smith; Motohiko Matsuda; Satoshi Matsuoka (SC, 2016)

High-performance conjugate gradient performance improvement on the K computer. - Kiyoshi Kumahata; Kazuo Minami; Naoya Maruyama (Int. J. High Perform. Comput. Appl., 2016)

Evaluating high-level design strategies on FPGAs for high-performance computing. - Artur Podobas; Hamid Reza Zohouri; Naoya Maruyama; Satoshi Matsuoka (FPL, 2017)

Optimizations of Two Compute-Bound Scientific Kernels on the SW26010 Many-Core Processor. - James Lin; Zhigeng Xu; Akira Nukada; Naoya Maruyama; Satoshi Matsuoka (ICPP, 2017)

Efficient Breadth-First Search on Massively Parallel and Distributed-Memory Machines. - Koji Ueno; Toyotaro Suzumura; Naoya Maruyama; Katsuki Fujisawa; Satoshi Matsuoka (Data Sci. Eng., 2017)

Trends in Data Locality Abstractions for HPC Systems. - Didem Unat; Anshu Dubey; Torsten Hoefler; John Shalf; Mark James Abraham; Mauro Bianco; Bradford L. Chamberlain; Romain Cledat; H. Carter Edwards; Hal Finkel; Karl Fuerlinger; Frank Hannig; et al. (IEEE Trans. Parallel Distributed Syst., 2017)

A Portability Layer of an All-pairs Operation for Hierarchical N-Body Algorithm Framework Tapas. - Motohiko Matsuda; Keisuke Fukuda; Naoya Maruyama (HPC Asia, 2018)

A Scalable Multi-Granular Data Model for Data Parallel Workflows. - Shin'ichiro Takizawa; Motohiko Matsuda; Naoya Maruyama; Yoshifumi Nakamura (HPC Asia, 2018)

Effective Quantization Approaches for Recurrent Neural Networks. - Md. Zahangir Alom; Adam T. Moody; Naoya Maruyama; Brian C. Van Essen; Tarek M. Taha (IJCNN, 2018)

Improving Strong-Scaling of CNN Training by Exploiting Finer-Grained Parallelism. - Nikoli Dryden; Naoya Maruyama; Tom Benson; Tim Moon; Marc Snir; Brian Van Essen (IPDPS, 2019)

Channel and filter parallelism for large-scale CNN training. - Nikoli Dryden; Naoya Maruyama; Tim Moon; Tom Benson; Marc Snir; Brian Van Essen (SC, 2019)

Preparation and optimization of a diverse workload for a large-scale heterogeneous system. - Ian Karlin; Yoonho Park; Bronis R. de Supinski; Peng Wang; Bert Still; David Beckingsale; Robert Blake; Tong Chen 001; Guojing Cong; Carlos H. A. Costa; Johann Dahm; Giacomo Domeniconi; et al. (SC, 2019)

AIMES: Advanced Computation and I/O Methods for Earth-System Simulations. - Julian M. Kunkel; Nabeeh Jumah; Anastasiia Novikova; Thomas Ludwig 002; Hisashi Yashiro; Naoya Maruyama; Mohamed Wahib; John Thuburn (Software for Exascale Computing, 2020)

Co-design Center for Exascale Machine Learning Technologies (ExaLearn). - Francis J. Alexander; James A. Ang; Jenna A. Bilbrey; Jan Balewski; Tiernan Casey; Ryan Chard; Jong Choi 001; Sutanay Choudhury; Bert J. Debusschere; Anthony M. DeGennaro; Nikoli Dryden; J. Austin Ellis; et al. (Int. J. High Perform. Comput. Appl., 2021)

The Case for Strong Scaling in Deep Learning: Training Large 3D CNNs With Hybrid Parallelism. - Yosuke Oyama; Naoya Maruyama; Nikoli Dryden; Erin McCarthy; Peter Harrington; Jan Balewski; Satoshi Matsuoka; Peter Nugent; Brian Van Essen (IEEE Trans. Parallel Distributed Syst., 2021)

A Low Power ΔΣ Modulator with Low Voltage OTA for Wearable Applications. - Naoya Maruyama; Satoshi Komatsu (ICM, 2024)