Combining probabilistic alignments with read pair information improves accuracy of split-alignments. - Anish Man Singh Shrestha; Naruki Yoshikawa; Kiyoshi Asai (Bioinform., 2018)

Fast, efficient fragment-based coordinate generation for Open Babel. - Naruki Yoshikawa; Geoffrey R. Hutchison (J. Cheminformatics, 2019)

Assigning Confidence to Molecular Property Prediction. - AkshatKumar Nigam; Robert Pollice; Matthew F. D. Hurley; Riley J. Hickman; Matteo Aldeghi; Naruki Yoshikawa; Seyone Chithrananda; Vincent A. Voelz; Alán Aspuru-Guzik (CoRR, 2021)

Twitter integration of chemistry software tools. - Naruki Yoshikawa; Ryuichi Kubo; Kazuki Z. Yamamoto (J. Cheminformatics, 2021)

An Adaptive Robotics Framework for Chemistry Lab Automation. - Naruki Yoshikawa; Andrew Zou Li; Kourosh Darvish; Yuchi Zhao; Haoping Xu; Alán Aspuru-Guzik; Animesh Garg; Florian Shkurti (CoRR, 2022)

Errors are Useful Prompts: Instruction Guided Task Programming with Verifier-Assisted Iterative Prompting. - Marta Skreta; Naruki Yoshikawa; Sebastian Arellano-Rubach; Zhi Ji; Lasse Bjørn Kristensen; Kourosh Darvish; Alán Aspuru-Guzik; Florian Shkurti; Animesh Garg (CoRR, 2023)

Large language models for chemistry robotics. - Naruki Yoshikawa; Marta Skreta; Kourosh Darvish; Sebastian Arellano-Rubach; Zhi Ji; Lasse Bjørn Kristensen; Andrew Zou Li; Yuchi Zhao; Haoping Xu; Artur Kuramshin; Alán Aspuru-Guzik; Florian Shkurti; et al. (Auton. Robots, 2023)

ORGANA: A Robotic Assistant for Automated Chemistry Experimentation and Characterization. - Kourosh Darvish; Marta Skreta; Yuchi Zhao; Naruki Yoshikawa; Sagnik Som; Miroslav Bogdanovic; Yang Cao; Han Hao; Haoping Xu; Alán Aspuru-Guzik; Animesh Garg; Florian Shkurti (CoRR, 2024)

Accelerating Discovery in Natural Science Laboratories with AI and Robotics: Perspectives and Challenges from the 2024 IEEE ICRA Workshop, Yokohama, Japan. - Andrew I. Cooper; Patrick Courtney; Kourosh Darvish; Moritz Eckhoff; Hatem Fakhruldeen; Andrea Gabrielli; Animesh Garg; Sami Haddadin; Kanako Harada; Jason Hein; Maria Hübner; Dennis Knobbe; et al. (CoRR, 2025)

RoboCulture: A Robotics Platform for Automated Biological Experimentation. - Kevin Angers; Kourosh Darvish; Naruki Yoshikawa; Sargol Okhovatian; Dawn Bannerman; Ilya Yakavets; Florian Shkurti; Alán Aspuru-Guzik; Milica Radisic (CoRR, 2025)