On the performance of particle swarm optimization for parameterizing kinetic models of cellular networks. - Natalie Berestovsky; Riya Fukui; Luay Nakhleh (CIBCB, 2012)

Modeling Integrated Cellular Machinery Using Hybrid Petri-Boolean Networks. - Natalie Berestovsky; Wanding Zhou; Deepak Nagrath; Luay Nakhleh (PLoS Comput. Biol., 2013)