ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data. - Lihua Julie Zhu; Claude Gazin; Nathan D. Lawson; Hervé Pagès; Simon M. Lin; David S. Lapointe; Michael R. Green (BMC Bioinform., 2010)

Zinc finger protein-dependent and -independent contributions to the in vivo off-target activity of zinc finger nucleases. - Ankit Gupta; Xiangdong Meng; Lihua Julie Zhu; Nathan D. Lawson; Scot A. Wolfe (Nucleic Acids Res., 2011)

Accurate identification of polyadenylation sites from 3′ end deep sequencing using a naïve Bayes classifier. - Sarah Sheppard; Nathan D. Lawson; Lihua Julie Zhu (Bioinform., 2013)