SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database. - Vineet Bafna; Nathan Edwards (ISMB (Supplement of Bioinformatics), 2001)

Visualization challenges for a new cyberpharmaceutical computing paradigm. - Russell J. Turner; Kabir Chaturvedi; Nathan Edwards; Daniel P. Fasulo; Aaron L. Halpern; Daniel H. Huson; Oliver Kohlbacher; Jason R. Miller; Knut Reinert; Karin A. Remington; Russell Schwartz; Brian Walenz; et al. (IEEE Symposium on Parallel and Large-Data Visualization and Graphics, 2001)

A Survey of Computational Methods for Determining Haplotypes. - Bjarni V. Halldórsson; Vineet Bafna; Nathan Edwards; Ross Lippert; Shibu Yooseph; Sorin Istrail (Computational Methods for SNPs and Haplotype Inference, 2002)

Generating Peptide Candidates from Amino-Acid Sequence Databases for Protein Identification via Mass Spectrometry. - Nathan Edwards; Ross Lippert (WABI, 2002)

Combinatorial Problems Arising in SNP and Haplotype Analysis. - Bjarni V. Halldórsson; Vineet Bafna; Nathan Edwards; Ross Lippert; Shibu Yooseph; Sorin Istrail (DMTCS, 2003)

On de novo interpretation of tandem mass spectra for peptide identification. - Vineet Bafna; Nathan Edwards (RECOMB, 2003)

Sequence Database Compression for Peptide Identification from Tandem Mass Spectra. - Nathan Edwards; Ross Lippert (WABI, 2004)

Alignment of Mass Spectrometry Data by Clique Finding and Optimization. - Daniel P. Fasulo; Anne-Katrin Emde; Lu-Yong Wang; Karin Noy; Nathan Edwards (Systems Biology and Computational Proteomics, 2006)

Peptide Identification via Tandem Mass Spectrometry. - Xue Wu 002; Nathan Edwards; Chau-Wen Tseng (Adv. Comput., 2006)

HMMatch: Peptide Identification by Spectral Matching of Tandem Mass Spectra Using Hidden Markov Models. - Xue Wu 002; Chau-Wen Tseng; Nathan Edwards (J. Comput. Biol., 2007)

Prediction of built-up edge formation in machining with round edge and sharp tools using a neural network approach. - Ning Fang; P. Srinivasa Pai; Nathan Edwards (Int. J. Comput. Integr. Manuf., 2010)

Design, Implementation, and Case Study of a Pragmatic Vibrotactile Belt. - Jacob Rosenthal; Nathan Edwards; Daniel Villanueva; Sreekar Krishna; Troy McDaniel; Sethuraman Panchanathan (IEEE Trans. Instrum. Meas., 2011)

Docking features for predicting binding loss due to protein mutation. - Norman Goodacre; Nathan Edwards; Mark Danielsen; Peter Uetz; Cathy H. Wu (BCB, 2014)

Predicting nsSNPs that Disrupt Protein-Protein Interactions Using Docking. - Norman Goodacre; Nathan Edwards; Mark Danielsen; Peter Uetz; Cathy H. Wu (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

On-Chip Randomization for Memory Protection Against Hardware Supply Chain Attacks to DRAM. - Brett Meadows; Nathan Edwards; Sang-Yoon Chang (SP (Workshops), 2020)

GlyGen data model and processing workflow. - Robel Y. Kahsay; Jeet Vora; Rahi Navelkar; Reza Mousavi; Brian C. Fochtman; Xavier Holmes; Nagarajan Pattabiraman; René Ranzinger; Rupali Mahadik; Tatiana Williamson; Sujeet Kulkarni; Gaurav Agarwal; et al. (Bioinform., 2020)

From Talent Shortage to Workforce Excellence in the CHIPS Act Era: Harnessing Industry 4.0 Paradigms for a Sustainable Future in Domestic Chip Production. - Aida Damanpak Rizi; Antika Roy; Rouhan Noor; Hyo Kang; Nitin Varshney; Katja Jacob; Sindia Rivera-Jimenez; Nathan Edwards; Volker J. Sorger; Hamed Dalir; Navid Asadizanjani (CoRR, 2023)

SCExecute: custom cell barcode-stratified analyses of scRNA-seq data. - Nathan Edwards; Christian Dillard; N. M. Prashant; Liu Hongyu; Mia Yang; Evgenia Ulianova; Anelia Horvath (Bioinform., 2023)