BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree. - Charles J. Norsigian; Neha Pusarla; John Luke McConn; James T. Yurkovich; Andreas Dräger; Bernhard O. Palsson; Zachary A. King (Nucleic Acids Res., 2020)

TRTools: a toolkit for genome-wide analysis of tandem repeats. - Nima Mousavi; Jonathan Margoliash; Neha Pusarla; Shubham Saini; Richard Yanicky; Melissa Gymrek (Bioinform., 2021)