Phylo2Vec: a vector representation for binary trees. - Matthew J. Penn; Neil Scheidwasser; Mark P. Khurana; David A. Duchêne; Christl A. Donnelly; Samir Bhatt (CoRR, 2023)

Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees. - Matthew J. Penn; Neil Scheidwasser; Joseph Penn; Christl A. Donnelly; David A. Duchêne; Samir Bhatt (CoRR, 2023)

Artificial intelligence for modelling infectious disease epidemics. - Moritz U. G. Kraemer; Joseph L.-H. Tsui; Serina Chang; Spyros Lytras; Mark P. Khurana; Samantha Vanderslott; Sumali Bajaj; Neil Scheidwasser; Jacob Liam Curran-Sebastian; Elizaveta Semenova; Mengyan Zhang; H. Juliette T. Unwin; et al. (Nat., 2025)

phylo2vec: a library for vector-based phylogenetic tree manipulation. - Neil Scheidwasser; Ayush Nag; Matthew J. Penn; Anthony MV Jakob; Frederik Mølkjær Andersen; Mark P. Khurana; Landung Setiawan; Madeline Gordon; David A. Duchêne; Samir Bhatt (CoRR, 2025)