A statistical approach for inferring the 3D structure of the genome. - Nelle Varoquaux; Ferhat Ay; William Stafford Noble; Jean-Philippe Vert (Bioinform., 2014)

Proceedings of the 6th European Conference on Python in Science (EuroSciPy 2013). - Pierre de Buyl; Nelle Varoquaux (CoRR, 2014)

Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014). - Pierre de Buyl; Nelle Varoquaux (CoRR, 2014)

Inferring the 3D architecture of the genome. (Inférence de la structure tri-dimensionnelle du génome). - Nelle Varoquaux (2015)

8th European Conference on Python in Science (EuroSciPy 2015). - Nelle Varoquaux (CoRR, 2016)

Effective normalization for copy number variation in Hi-C data. - Nicolas Servant; Nelle Varoquaux; Edith Heard; Emmanuel Barillot; Jean-Philippe Vert (BMC Bioinform., 2018)

The Types, Roles, and Practices of Documentation in Data Analytics Open Source Software Libraries - A Collaborative Ethnography of Documentation Work. - R. Stuart Geiger; Nelle Varoquaux; Charlotte Mazel-Cabasse; Chris Holdgraf (Comput. Support. Cooperative Work., 2018)

Inferring Diploid 3D Chromatin Structures from Hi-C Data. - Alexandra Gesine Cauer; Gürkan Yardimci; Jean-Philippe Vert; Nelle Varoquaux; William Stafford Noble (WABI, 2019)

iced: fast and memory efficient normalization of contact maps. - Nelle Varoquaux; Nicolas Servant (J. Open Source Softw., 2019)

Community, Time, and (Con)text: A Dynamical Systems Analysis of Online Communication and Community Health among Open-Source Software Communities. - Alexandra Paxton; Nelle Varoquaux; Chris Holdgraf; R. Stuart Geiger (Cogn. Sci., 2022)

Inference of 3D genome architecture by modeling overdispersion of Hi-C data. - Nelle Varoquaux; William S. Noble; Jean-Philippe Vert (Bioinform., 2023)