Analysis of Functional Interactions of Enzymes in Mycoplasma pneumoniae. - Adriana Neves dos Reis; Cláudia K. Barcellos; Fabiana Herédia; Jean J. Schmith; José C. M. Mombach; Ney Lemke; Rejane A. Ferreira (WOB, 2002)

A Method to Identify Essential Enzymes in the Metabolism: Application to Escherichia Coli. - Ney Lemke; Fabiana Herédia; Cláudia K. Barcellos; José C. M. Mombach (CMSB, 2003)

An Integrated Model for Cellular Analysis. - Eduardo Battistella; José Souza; Cláudia K. Barcellos; Ney Lemke; José C. M. Mombach (WOB, 2004)

Essentiality and damage in metabolic networks. - Ney Lemke; Fabiana Herédia; Cláudia K. Barcellos; Adriana Neves dos Reis; José C. M. Mombach (Bioinform., 2004)

YAMONES: A Computational Architecture for Molecular Network Simulation. - Guilherme Balestieri Bedin; Ney Lemke (BSB, 2005)

An Improved Hidden Markov Model Methodology to Discover Prokaryotic Promoters. - Adriana Neves dos Reis; Ney Lemke (BSB, 2005)

Bioinformatics analysis of mycoplasma metabolism: Important enzymes, metabolic similarities, and redundancy. - José C. M. Mombach; Ney Lemke; Norma M. da Silva; Rejane A. Ferreira; Eduardo Isaia; Cláudia K. Barcellos (Comput. Biol. Medicine, 2006)

Automatic Classification of Enzyme Family in Protein Annotation. - Cássia Trojahn dos Santos; Ana L. C. Bazzan; Ney Lemke (BSB, 2009)

Towards the prediction of essential genes by integration of network topology, cellular localization and biological process information. - Marcio Luis Acencio; Ney Lemke (BMC Bioinform., 2009)

The development of an open-access database for human transcriptional regulation interactions. - Luiz A. Bovolenta; Marcio Luis Acencio; Ney Lemke (BMC Bioinform., 2011)

Poster: Quantification of correlations between sleep spindles in EEG for patients with sleep apnea. - Rafael Toledo F. de Souza; José Luiz Rybarczyk Filho; Ney Lemke; Suzana V. Schönwald; Emerson L. de Santa-Helena; Günther J. L. Gerhardt (ICCABS, 2013)

GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks. - Esther Camilo; Luiz A. Bovolenta; Marcio Luis Acencio; José L. Rybarczyk Filho; Mauro A. A. Castro; José C. F. Moreira; Ney Lemke (Bioinform., 2013)

An ensemble framework for identifying essential proteins. - Xue Zhang 005; Wangxin Xiao; Marcio Luis Acencio; Ney Lemke; Xujing Wang (BMC Bioinform., 2016)