Active Membrane Systems Without Charges and Using Only Symmetric Elementary Division Characterise P. - Niall Murphy; Damien Woods (Workshop on Membrane Computing, 2007)

A Characterisation of NL Using Membrane Systems without Charges and Dissolution. - Niall Murphy; Damien Woods (UC, 2008)

On acceptance conditions for membrane systems: characterisations of L and NL - Niall Murphy; Damien Woods (CSP, 2008)

Implementations of a Model of Physical Sorting. - Niall Murphy; Thomas J. Naughton; Damien Woods; Beverley Henley; Kieran McDermott; Elaine Duffy; Peter J. M. Van Der Burgt; Niamh Woods (Int. J. Unconv. Comput., 2008)

Membrane Dissolution and Division in P. - Damien Woods; Niall Murphy; Mario J. Pérez-Jiménez; Agustin Riscos-Núñez (UC, 2009)

The computational power of membrane systems under tight uniformity conditions. - Niall Murphy; Damien Woods (Nat. Comput., 2011)

Distributed Computing with Prokaryotic Immune Systems. - Niall Murphy; Alfonso Rodríguez-Patón (ICARIS, 2012)

AND and/or OR: Uniform Polynomial-Size Circuits - Niall Murphy; Damien Woods (MCU, 2013)

Uniformity is Weaker than Semi-Uniformity for Some Membrane Systems. - Niall Murphy; Damien Woods (Fundam. Informaticae, 2014)

Wang's B machines are efficiently universal, as is Hasenjaeger's small universal electromechanical toy. - Turlough Neary; Damien Woods; Niall Murphy; Rainer Glaschick (J. Complex., 2014)

Synthesizing and Tuning Chemical Reaction Networks with Specified Behaviours. - Neil Dalchau; Niall Murphy; Rasmus L. Petersen; Boyan Yordanov (DNA, 2015)

Performance implications of transient loop-carried data dependences in automatically parallelized loops. - Niall Murphy; Timothy M. Jones 001; Robert D. Mullins; Simone Campanoni (CC, 2016)

A Case for Noisy Shallow Gate-based Circuits in Quantum Machine Learning. - Patrick Selig; Niall Murphy; Ashwin Sundareswaran R; David Redmond; Simon Caton (ICRC, 2021)

Neural-like P systems with plasmids. - Francis George C. Cabarle; Xiangxiang Zeng; Niall Murphy; Tao Song 001; Alfonso Rodríguez-Patón; Xiangrong Liu (Inf. Comput., 2021)

DeepQPrep: Neural Network Augmented Search for Quantum State Preparation. - Patrick Selig; Niall Murphy; David Redmond; Simon Caton (IEEE Access, 2023)

Compilation Techniques for Spin Qubits in a Shuttling Bus Architecture. - Pau Escofet; Andrii Semenov; Niall Murphy; Elena Blokhina; Sergi Abadal; Eduard Alarcón; Carmen G. Almudéver (ISCAS, 2025)

On the Challenges of Quantum Circuit Encoding Using Deep and Reinforcement Learning. - Patrick Selig; Niall Murphy; David Redmond; Simon Caton (IEEE Access, 2025)