Next generation modeling II - applications: improving the development process for eukaryotic cell cycle models with a modeling support environment. - Nicholas A. Allen; Clifford A. Shaffer; Marc Vass; Naren Ramakrishnan; Layne T. Watson (WSC, 2003)

Improving the Development Process for Eukaryotic Cell Cycle Models with a Modeling Support Environment. - Nicholas A. Allen; Clifford A. Shaffer; Naren Ramakrishnan; Marc T. Vass; Layne T. Watson (Simul., 2003)

The JigCell Model Builder and Run Manager. - Marc Vass; Nicholas A. Allen; Clifford A. Shaffer; Naren Ramakrishnan; Layne T. Watson; John J. Tyson (Bioinform., 2004)

Building modeling tools that support verification, validation, and testing for the domain expert. - Nicholas A. Allen; Clifford A. Shaffer; Layne T. Watson (WSC, 2005)

Computational Software for Building Biochemical Reaction Network Models with Differential Equations. - Nicholas A. Allen (2005)

Deterministic parallel global parameter estimation for a model of the budding yeast cell cycle. - Thomas D. Panning; Layne T. Watson; Nicholas A. Allen; Katherine C. Chen; Clifford A. Shaffer; John J. Tyson (J. Glob. Optim., 2008)