Fast genome-wide epistasis analysis using ant colony optimization for multifactor dimensionality reduction analysis on graphics processing units. - Nicholas A. Sinnott-Armstrong; Casey S. Greene; Jason H. Moore (GECCO, 2010)

Multifactor dimensionality reduction for graphics processing units enables genome-wide testing of epistasis in sporadic ALS. - Casey S. Greene; Nicholas A. Sinnott-Armstrong; Daniel S. Himmelstein; Paul J. Park; Jason H. Moore; Brent T. Harris (Bioinform., 2010)

Random artificial incorporation of noise in a learning classifier system environment. - Ryan J. Urbanowicz; Nicholas A. Sinnott-Armstrong; Jason H. Moore (GECCO (Companion), 2011)

Characterizing Genetic Interactions in Human Disease Association Studies Using Statistical Epistasis Networks. - Ting Hu 001; Nicholas A. Sinnott-Armstrong; Jeff Kiralis; Angeline S. Andrew; Margaret R. Karagas; Jason H. Moore (BMC Bioinform., 2011)

BioLite, a Lightweight Bioinformatics Framework with Automated Tracking of Diagnostics and Provenance. - Mark Howison; Nicholas A. Sinnott-Armstrong; Casey W. Dunn (TaPP, 2012)

GAMETES: a fast, direct algorithm for generating pure, strict, epistatic models with random architectures. - Ryan J. Urbanowicz; Jeff Kiralis; Nicholas A. Sinnott-Armstrong; Tamra Heberling; Jonathan M. Fisher; Jason H. Moore (BioData Min., 2012)

Cell-Based Metrics Improve the Detection of Gene-Gene Interactions Using Multifactor Dimensionality Reduction. - Jonathan M. Fisher; Peter C. Andrews; Jeff Kiralis; Nicholas A. Sinnott-Armstrong; Jason H. Moore (EvoBIO, 2013)

Integrative analysis of 111 reference human epigenomes Open. - Roadmap Epigenomics Consortium; Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi Moussavi; Pouya Kheradpour; ZhiZhuo Zhang; Jianrong Wang; Michael J. Ziller; Viren Amin; et al. (Nat., 2015)