Building visual maps by combining noisy stereo measurements. - Olivier D. Faugeras; Nicholas Ayache; Bernard Faverjon (ICRA, 1986)

HYPER: A New Approach for the Recognition and Positioning of Two-Dimensional Objects. - Nicholas Ayache; Olivier D. Faugeras (IEEE Trans. Pattern Anal. Mach. Intell., 1986)

Building a Consistent 3D Representation of a Mobile Robot Environment by Combining Multiple Stereo Views. - Nicholas Ayache; Olivier D. Faugeras (IJCAI, 1987)

Trinocular Stereovision: Recent Results. - Nicholas Ayache; Francis Lustman (IJCAI, 1987)

Efficient registration of stereo images by matching graph descriptions of edge segments. - Nicholas Ayache; Bernard Faverjon (Int. J. Comput. Vis., 1987)

Towards Real-time Trinocular Stereo. - Charles D. Hansen; Nicholas Ayache; Francis Lustman (ICCV, 1988)

Analysis Of A Sequence Of Stereo Scenes Containing Multiple Moving Objects Using Rigidity Constraints. - Zhengyou Zhang; Olivier D. Faugeras; Nicholas Ayache (ICCV, 1988)

Rectification of images for binocular and trinocular stereovision. - Nicholas Ayache; Charles D. Hansen (ICPR, 1988)

Visual Navigation of a Mobile Robot: Recent Steps. - Nicholas Ayache; Olivier D. Faugeras; Francis Lustman; Zhengyou Zhang (IROS, 1988)

Building, Registrating, and Fusing Noisy Visual Maps. - Nicholas Ayache; Olivier D. Faugeras (Int. J. Robotics Res., 1988)

Building 3-D Edge-Lines Tracked in an Image Sequence. - Thomas Skordas; Pierre Puget; R. Zigmann; Nicholas Ayache (IAS, 1989)

Maintaining representations of the environment of a mobile robot. - Nicholas Ayache; Olivier D. Faugeras (IEEE Trans. Robotics Autom., 1989)

Maintaining Representations of the Environment of a Mobile Robot. - Nicholas Ayache; Olivier D. Faugeras (Autonomous Robot Vehicles, 1990)

Final Steps Towards Real Time Trinocular Stereovision. - Gregory Randall; Serge Foret; Nicholas Ayache (ECCV, 1990)

3D structure from a monocular sequence of images. - Jean-Luc Jezouin; Nicholas Ayache (ICCV, 1990)

Artificial vision for mobile robots - stereo vision and multisensory perception. - Nicholas Ayache (MIT Press, 1991)

Introducing new deformable surfaces to segment 3D images. - Isaac Cohen; Laurent D. Cohen; Nicholas Ayache (CVPR, 1991)

From voxel to curvature. - Olivier Monga; Nicholas Ayache; Peter T. Sander (CVPR, 1991)

A New Physically Based Model for Efficient Tracking and Analysis of Deformations. - Chahab Nastar; Nicholas Ayache (Geometric Reasoning for Perception and Action, 1991)

Topological Classification in Digital Space. - Grégoire Malandain; Gilles Bertrand 001; Nicholas Ayache (IPMI, 1991)

Using Uncertainty to Link 3D Edge Detection and Local Surface Modelling. - Olivier Monga; Nicholas Ayache; Peter T. Sander (IPMI, 1991)

Trinocular Stereo Vision for Robotics. - Nicholas Ayache; Francis Lustman (IEEE Trans. Pattern Anal. Mach. Intell., 1991)

Tracking Points on Deformable Objects Using Curvature Information. - Isaac Cohen; Nicholas Ayache; Patrick Sulger (ECCV, 1992)

Using deformable surfaces to segment 3-D images and infer differential structures. - Isaac Cohen; Laurent D. Cohen; Nicholas Ayache (CVGIP Image Underst., 1992)

The Depth and Motion Analysis Machine. - Olivier D. Faugeras; Rachid Deriche; Hervé Mathieu; Nicholas Ayache; Gregory Randall (Int. J. Pattern Recognit. Artif. Intell., 1992)

Features extraction and analysis methods for sequences of ultrasound Images. - Isabelle Herlin; Nicholas Ayache (Image Vis. Comput., 1992)

From voxel to intrinsic surface features. - Olivier Monga; Nicholas Ayache; Peter T. Sander (Image Vis. Comput., 1992)

New developments on geometric hashing for curve matching. - André Guéziec; Nicholas Ayache (CVPR, 1993)

Robustness of model-based recognition in cluttered images. - R. L. Vergnet; Philippe Saint-Marc; Nicholas Ayache (CVPR, 1993)

Fast segmentation, tracking, and analysis of deformable objects. - Chahab Nastar; Nicholas Ayache (ICCV, 1993)

Non-Rigid Motion Analysis in Medical Images: a Physically Based Approach. - Chahab Nastar; Nicholas Ayache (IPMI, 1993)

Topological segmentation of discrete surfaces. - Grégoire Malandain; Gilles Bertrand 001; Nicholas Ayache (Int. J. Comput. Vis., 1993)

Locally affine registration of free-form surfaces. - Jacques Feldmar; Nicholas Ayache (CVPR, 1994)

Rigid and Affine Registration of Smooth Surfaces using Differential Properties. - Jacques Feldmar; Nicholas Ayache (ECCV (2), 1994)

Registration of a Curve on a Surface Using Differential Properties. - Alexis Gourdon; Nicholas Ayache (ECCV (2), 1994)

Fitting 3-D data using superquadrics and free-form deformations. - Éric Bardinet; Laurent D. Cohen; Nicholas Ayache (ICPR (1), 1994)

Adaptive meshes and nonrigid motion computation. - Serge Benayoun; Nicholas Ayache; Isaac Cohen (ICPR (1), 1994)

Non rigid registration for building 3D anatomical atlases. - Gérard Subsol; Jean-Philippe Thirion; Nicholas Ayache (ICPR (1), 1994)

Time Representation of Deformations: Combining Vibration Modes and Fourier Analysis. - Chahab Nastar; Nicholas Ayache (Object Representation in Computer Vision, 1994)

Steps towards automatic building of anatomical atlases. - Gérard Subsol; Jean-Philippe Thirion; Nicholas Ayache (VBC, 1994)

Smoothing and matching of 3-d space curves. - André Guéziec; Nicholas Ayache (Int. J. Comput. Vis., 1994)

Medical Computer Vision, Virtual Reality and Robotics: Promising Research Tracks. - Nicholas Ayache (BMVC, 1995)

Superquadrics and Free-Form Deformations: A Global Model to Fit and Track 3D Medical Data. - Éric Bardinet; Laurent D. Cohen; Nicholas Ayache (CVRMed, 1995)

Dense Non-Rigid Motion Estimation in Sequences of 3D Images Using Differential Constraints. - Serge Benayoun; Chahab Nastar; Nicholas Ayache (CVRMed, 1995)

A New Framework for Fusing Stereo Images with Volumetric Medical Images. - Fabienne Betting; Jacques Feldmar; Nicholas Ayache; Frederic Devernay (CVRMed, 1995)

Automatic Retrieval of Anatomical Structures in 3D Medical Images. - Jérôme Declerck; Gérard Subsol; Jean-Philippe Thirion; Nicholas Ayache (CVRMed, 1995)

Medical computer vision, virtual reality and robotics. - Nicholas Ayache (Image Vis. Comput., 1995)

Randomness and Geometric Features in Computer Vision. - Xavier Pennec; Nicholas Ayache (CVPR, 1996)

Tracking Medical 3D Data with a Deformable Parametric Model. - Éric Bardinet; Laurent D. Cohen; Nicholas Ayache (ECCV (1), 1996)

Reconstruction of buildings from multiple high resolution images. - David Canu; Jean-Pierre Gambotto; Jacques Ariel Sirat; Nicholas Ayache (ICIP (2), 1996)

Real Time Volumetric Deformable Models for Surgery Simulation. - Stephane Cotin; Hervé Delingette; Nicholas Ayache (VBC, 1996)

Bias Field Correction of Breast MR Images. - Sébastien Gilles; Michael Brady 001; Jérôme Declerck; Jean-Philippe Thirion; Nicholas Ayache (VBC, 1996)

Application of an Automatically Built 3D Morphometric Brain Atlas: Study of Cerebral Ventricle Shape. - Gérard Subsol; Jean-Philippe Thirion; Nicholas Ayache (VBC, 1996)

Rigid, affine and locally affine registration of free-form surfaces. - Jacques Feldmar; Nicholas Ayache (Int. J. Comput. Vis., 1996)

From the Editors. - Nicholas Ayache; James S. Duncan (Medical Image Anal., 1996)

Tracking and motion analysis of the left ventricle with deformable superquadrics. - Éric Bardinet; Laurent D. Cohen; Nicholas Ayache (Medical Image Anal., 1996)

Analyzing 3D Images of the Brain. - Nicholas Ayache (NeuroImage, 1996)

Frequency-Based Nonrigid Motion Analysis: Application to Four Dimensional Medical Images. - Chahab Nastar; Nicholas Ayache (IEEE Trans. Pattern Anal. Mach. Intell., 1996)

Medical Image Analysis and Simulation. - Nicholas Ayache (ASIAN, 1997)

Definition of a 4D continuous polar transformation for the tracking and the analysis of LV motion. - Jérôme Declerck; Jacques Feldmar; Nicholas Ayache (CVRMed, 1997)

Matching 3D MR angiography data and 2D X-ray angiograms. - Jacques Feldmar; Grégoire Malandain; Nicholas Ayache; Sara Fernández-Vidal; Eric Maurincomme; Yves Trousset (CVRMed, 1997)

SPECT memory activation studies thanks to non-rigid automated 3D image registration. - Octave Migneco; Jean-Philippe Thirion; Michel Benoit; Grégoire Malandain; Philippe Robert; Nicholas Ayache; Jacques Darcourt (CVRMed, 1997)

Directional Anisotropic Diffusion Applied to Segmentation of Vessels in 3D Images. - Karl Krissian; Grégoire Malandain; Nicholas Ayache (Scale-Space, 1997)

3D-2D Projective Registration of Free-Form Curves and Surfaces. - Jacques Feldmar; Nicholas Ayache; Fabienne Betting (Comput. Vis. Image Underst., 1997)

Extension of the ICP Algorithm to Nonrigid Intensity-Based Registration of 3D Volumes. - Jacques Feldmar; Jérôme Declerck; Grégoire Malandain; Nicholas Ayache (Comput. Vis. Image Underst., 1997)

Model-Based Multiscale Detection of 3D Vessels. - Karl Krissian; Grégoire Malandain; Nicholas Ayache; Régis Vaillant; Yves Trousset (CVPR, 1998)

Medical image analysis a challenge for computer vision research. - Nicholas Ayache (ICPR, 1998)

The Correlation Ratio as a New Similarity Measure for Multimodal Image Registration. - Alexis Roche; Grégoire Malandain; Xavier Pennec; Nicholas Ayache (MICCAI, 1998)

A geometric algorithm to find small but highly similar 3D substructures in proteins. - Xavier Pennec; Nicholas Ayache (Bioinform., 1998)

A Parametric Deformable Model to Fit Unstructured 3D Data. - Éric Bardinet; Laurent D. Cohen; Nicholas Ayache (Comput. Vis. Image Underst., 1998)

Dense Non-Rigid Motion Estimation in Sequences of Medical Images Using Differential Constraints. - Serge Benayoun; Nicholas Ayache (Int. J. Comput. Vis., 1998)

Uniform Distribution, Distance and Expectation Problems for Geometric Features Processing. - Xavier Pennec; Nicholas Ayache (J. Math. Imaging Vis., 1998)

Definition of a four-dimensional continuous planispheric transformation for the tracking and the analysis of left-ventricle motion. - Jérôme Declerck; Jacques Feldmar; Nicholas Ayache (Medical Image Anal., 1998)

A scheme for automatically building three-dimensional morphometric anatomical atlases: application to a skull atlas. - Gérard Subsol; Jean-Philippe Thirion; Nicholas Ayache (Medical Image Anal., 1998)

A Hybrid Elastic Model Allowing Real-Time Cutting, Deformations and Force-Feedback for Surgery Training and Simulation. - Hervé Delingette; Stephane Cotin; Nicholas Ayache (CA, 1999)

Machine Vision for Medical Image Analysis and Virtual Surgery. - Nicholas Ayache (ICIAP, 1999)

Understanding the "Demon's Algorithm": 3D Non-rigid Registration by Gradient Descent. - Xavier Pennec; Pascal Cachier; Nicholas Ayache (MICCAI, 1999)

Towards a Better Comprehension of Similarity Measures Used in Medical Image Registration. - Alexis Roche; Grégoire Malandain; Nicholas Ayache; Sylvain Prima (MICCAI, 1999)

Real-Time Elastic Deformations of Soft Tissues for Surgery Simulation. - Stephane Cotin; Hervé Delingette; Nicholas Ayache (IEEE Trans. Vis. Comput. Graph., 1999)

Computation of the Mid-Sagittal Plane in 3D Medical Images of the Brain. - Sylvain Prima; Sébastien Ourselin; Nicholas Ayache (ECCV (2), 2000)

Multimodal Elastic Matching of Brain Images. - Alexis Roche; Alexandre Guimond; Nicholas Ayache; Jean Meunier (ECCV (2), 2000)

Surface Simplex Meshes for 3D Medical Image Segmentation. - Johan Montagnat; Hervé Delingette; N. Scapel; Nicholas Ayache (ICRA, 2000)

Anisotropic Elasticity and Force Extrapolation to Improve Realism of Surgery Simulation. - Guillaume Picinbono; Jean-Christophe Lombardo; Hervé Delingette; Nicholas Ayache (ICRA, 2000)

3-D Reconstruction of Macroscopic Optical Brain Slice Images. - Alan C. F. Colchester; Sébastien Ourselin; Yonggen Zhu; Éric Bardinet; Yang He; Alexis Roche; Safa Al-Sarraj; Bill Nailon; James Ironside; Nicholas Ayache (MICCAI, 2000)

Block Matching: A General Framework to Improve Robustness of Rigid Registration of Medical Images. - Sébastien Ourselin; Alexis Roche; Sylvain Prima; Nicholas Ayache (MICCAI, 2000)

Real-Time Large Displacement Elasticity for Surgery Simulation: Non-linear Tensor-Mass Model. - Guillaume Picinbono; Hervé Delingette; Nicholas Ayache (MICCAI, 2000)

Generalized Correlation Ratio for Rigid Registration of 3D Ultrasound with MR Images. - Alexis Roche; Xavier Pennec; Michael Rudolph 003; Dorothee Auer; Grégoire Malandain; Sébastien Ourselin; Ludwig M. Auer; Nicholas Ayache (MICCAI, 2000)

Fully automatic anatomical, pathological, and functional segmentation from CT scans for hepatic surgery. - Luc Soler; Herve Delingette; Grégoire Malandain; Johan Montagnat; Nicholas Ayache; Jean-Marie Clement; Christophe Koehl; Olivier Dourthe; Didier Mutter; Jacques Marescaux (Image Processing, 2000)

Machine Vision for Medicine of 21st Century. - Nicholas Ayache (MVA, 2000)

Model-Based Detection of Tubular Structures in 3D Images. - Karl Krissian; Grégoire Malandain; Nicholas Ayache; Régis Vaillant; Yves Trousset (Comput. Vis. Image Underst., 2000)

Unifying maximum likelihood approaches in medical image registration. - Alexis Roche; Grégoire Malandain; Nicholas Ayache (Int. J. Imaging Syst. Technol., 2000)

Welcome to the first issue of the new millennium. - Nicholas Ayache; James S. Duncan (Medical Image Anal., 2000)

Medical Image Analysis: Progress over Two Decades and the Challenges Ahead. - James S. Duncan; Nicholas Ayache (IEEE Trans. Pattern Anal. Mach. Intell., 2000)

A hybrid elastic model for real-time cutting, deformations, and force feedback for surgery training and simulation. - Stephane Cotin; Hervé Delingette; Nicholas Ayache (Vis. Comput., 2000)

New methods and algorithms for the accurate, real-time motion analysis of the left ventricle with MRI-tagging. - Cyril F. Allouche; Shérif Makram-Ebeid; Matthias Stuber; Nicholas Ayache; Herve Delingette (CARS, 2001)

A New Kinetic Modeling Scheme for the Human Left Ventricle Wall Motion with MR-Tagging Imaging. - Cyril F. Allouche; S. Makam; Nicholas Ayache; Herve Delingette (FIMH, 2001)

Towards Model-Based Estimation of the Cardiac Electro-Mechanical Activity from ECG Signals and Ultrasound Images. - Nicholas Ayache; Dominique Chapelle; Frédérique Clément; Yves Coudière; Hervé Delingette; Jean-Antoine Désidéri; Maxime Sermesant; Michel Sorine; José M. Urquiza (FIMH, 2001)

Non-linear and Anisotropic Elastic Soft Tissue Models for Medical Simulation. - Guillaume Picinbono; Hervé Delingette; Nicholas Ayache (ICRA, 2001)

Non-Rigid MR/US Registration for Tracking Brain Deformations. - Xavier Pennec; Nicholas Ayache; Alexis Roche; Pascal Cachier (MIAR, 2001)

Registration of Reconstructed Post Mortem Optical Data with MR Scans of the Same Patient. - Éric Bardinet; Alan C. F. Colchester; Alexis Roche; Yonggen Zhu; Yang He; Sébastien Ourselin; Bill Nailon; S. Ali Hojjat 001; James Ironside; Safa Al-Sarraj; Nicholas Ayache; Joanna M. Wardlaw (MICCAI, 2001)

Multisubject Non-rigid Registration of Brain MRI Using Intensity and Geometric Features. - Pascal Cachier; Jean-François Mangin; Xavier Pennec; Denis Rivière; Dimitri Papadopoulos-Orfanos; Jean Régis; Nicholas Ayache (MICCAI, 2001)

Retrospective Evaluation of Inter-subject Brain Registration. - Pierre Hellier; Christian Barillot; Isabelle Corouge; Bernard Gibaud; Georges Le Goualher; D. Louis Collins; Alan C. Evans; Grégoire Malandain; Nicholas Ayache (MICCAI, 2001)

Fusion of Histological Sections and MR Images: Towards the Construction of an Atlas of the Human Basal Ganglia. - Sébastien Ourselin; Éric Bardinet; Didier Dormont; Grégoire Malandain; Alexis Roche; Nicholas Ayache; Dominique Tandé; K. Parain; Jérôme Yelnik (MICCAI, 2001)

Maximum Likelihood Estimation of the Bias Field in MR Brain Images: Investigating Different Modelings of the Imaging Process. - Sylvain Prima; Nicholas Ayache; Tom Barrick; Neil Roberts (MICCAI, 2001)

Using SPM to Detect Evolving MS Lesions. - David Rey; Jonathan Stoeckel; Grégoire Malandain; Nicholas Ayache (MICCAI, 2001)

An Electro-mechanical Model of the Heart for Cardiac Image Analysis. - Maxime Sermesant; Yves Coudière; Hervé Delingette; Nicholas Ayache; Jean-Antoine Désidéri (MICCAI, 2001)

Classification of SPECT Images of Normal Subjects versus Images of Alzheimer's Disease Patients. - Jonathan Stoeckel; Grégoire Malandain; Octave Migneco; Pierre Malick Koulibaly; Philippe Robert; Nicholas Ayache; Jacques Darcourt (MICCAI, 2001)

A review of deformable surfaces: topology, geometry and deformation. - Johan Montagnat; Hervé Delingette; Nicholas Ayache (Image Vis. Comput., 2001)

Reconstructing a 3D structure from serial histological sections. - Sébastien Ourselin; Alexis Roche; Gérard Subsol; Xavier Pennec; Nicholas Ayache (Image Vis. Comput., 2001)

Three-Dimensional Multimodal Brain Warping using the Demons Algorithm and Adaptive Intensity Corrections. - Alexandre Guimond; Alexis Roche; Nicholas Ayache; Jean Meunier (IEEE Trans. Medical Imaging, 2001)

Rigid Registration of 3D Ultrasound with MR Images: A New Approach Combining Intensity and Gradient Information. - Alexis Roche; Xavier Pennec; Grégoire Malandain; Nicholas Ayache (IEEE Trans. Medical Imaging, 2001)

Removing Tetrahedra from a Manifold Mesh. - Clement Forest; Hervé Delingette; Nicholas Ayache (CA, 2002)

Three dimensional functional cartography of the human basal ganglia by registration of optical and histological serial sections. - Éric Bardinet; Sébastien Ourselin; Grégoire Malandain; Dominique Tandé; K. Parain; Nicholas Ayache; Jérôme Yelnik (ISBI, 2002)

Parcellation of brain images with anatomical and functional constraints for fMRI data analysis. - Guillaume Flandin; Ferath Kherif; Xavier Pennec; Denis Rivière; Nicholas Ayache; Jean-Baptiste Poline (ISBI, 2002)

Progress towards an electromechanical model of the heart for cardiac image analysis. - Maxime Sermesant; Yves Coudière; Hervé Delingette; Nicholas Ayache (ISBI, 2002)

A Posteriori Validation of Pre-operative Planning in Functional Neurosurgery by Quantification of Brain Pneumocephalus. - Éric Bardinet; Pascal Cathier; Alexis Roche; Nicholas Ayache; Didier Dormont (MICCAI (1), 2002)

Co-registration of Histological, Optical and MR Data of the Human Brain. - Éric Bardinet; Sébastien Ourselin; Didier Dormont; Grégoire Malandain; Dominique Tandé; K. Parain; Nicholas Ayache; Jérôme Yelnik (MICCAI (1), 2002)

Improved Detection Sensitivity in Functional MRI Data Using a Brain Parcelling Technique. - Guillaume Flandin; Ferath Kherif; Xavier Pennec; Grégoire Malandain; Nicholas Ayache; Jean-Baptiste Poline (MICCAI (1), 2002)

Cutting Simulation of Manifold Volumetric Meshes. - Clement Forest; Hervé Delingette; Nicholas Ayache (MICCAI (2), 2002)

Statistical Analysis of Longitudinal MRI Data: Applications for Detection of Disease Activity in MS. - Sylvain Prima; Nicholas Ayache; Andrew L. Janke; Simon J. Francis; Douglas L. Arnold; D. Louis Collins (MICCAI (1), 2002)

Biomechanical Model Construction from Different Modalities: Application to Cardiac Images. - Maxime Sermesant; Clement Forest; Xavier Pennec; Hervé Delingette; Nicholas Ayache (MICCAI (1), 2002)

Improving realism of a surgery simulator: linear anisotropic elasticity, complex interactions and force extrapolation. - Guillaume Picinbono; Jean-Christophe Lombardo; Hervé Delingette; Nicholas Ayache (Comput. Animat. Virtual Worlds, 2002)

Automatic detection and segmentation of evolving processes in 3D medical images: Application to multiple sclerosis. - David Rey; Gérard Subsol; Hervé Delingette; Nicholas Ayache (Medical Image Anal., 2002)

Computation of the Mid-Sagittal Plane in 3D Brain Images. - Sylvain Prima; Sébastien Ourselin; Nicholas Ayache (IEEE Trans. Medical Imaging, 2002)

4D deformation field of coronary arteries from monoplane rotational X-ray angiography. - Christophe Blondel; Grégoire Malandain; Régis Vaillant; Nicholas Ayache (CARS, 2003)

From Medical Images to Virtual Surgery: Combining Geometrical, Physical and Physiological Modeling. - Nicholas Ayache (DICTA, 2003)

Patient-Specific Biomechanical Model of the Brain: Application to Parkinson's Disease Procedure. - Olivier Clatz; Hervé Delingette; Éric Bardinet; Didier Dormont; Nicholas Ayache (IS4TH, 2003)

Evaluation of a New 3D/2D Registration Criterion for Liver Radio-Frequencies Guided by Augmented Reality. - Stéphane Nicolau; Xavier Pennec; Luc Soler; Nicholas Ayache (IS4TH, 2003)

Preliminary Validation Using in vivo Measures of a Macroscopic Electrical Model of the Heart. - Maxime Sermesant; Owen Faris; Franck Evans; Elliot R. McVeigh; Yves Coudière; Hervé Delingette; Nicholas Ayache (IS4TH, 2003)

Polyrigid and Polyaffine Transformations: A New Class of Diffeomorphisms for Locally Rigid or Affine Registration. - Vincent Arsigny; Xavier Pennec; Nicholas Ayache (MICCAI (2), 2003)

Generalized Image Models and Their Application as Statistical Models of Images. - Miguel Ángel González Ballester; Xavier Pennec; Nicholas Ayache (MICCAI (2), 2003)

4-D Tomographic Representation of Coronary Arteries from One Rotational X-Ray Sequence. - Christophe Blondel; Grégoire Malandain; Régis Vaillant; Frederic Devernay; Ève Coste-Manière; Nicholas Ayache (MICCAI (1), 2003)

2-D to 3-D Refinement of Post Mortem Optical and MRI Co-registration. - Chris Kenwright; Éric Bardinet; S. Ali Hojjat 001; Grégoire Malandain; Nicholas Ayache; Alan C. F. Colchester (MICCAI (2), 2003)

A Multiscale Feature Detector for Morphological Analysis of the Brain. - Marius George Linguraru; Miguel Ángel González Ballester; Nicholas Ayache (MICCAI (2), 2003)

Expert Knowledge Guided Segmentation System for Brain MRI. - Alain Pitiot; Hervé Delingette; Nicholas Ayache; Paul M. Thompson (MICCAI (2), 2003)

Grid Enabled Non-rigid Registration with a Dense Transformation and a priori Information. - Radu Stefanescu; Xavier Pennec; Nicholas Ayache (MICCAI (2), 2003)

New Vector Field Regularization Techniques for Nonrigid Image Registration. - Pascal Cathier; Nicholas Ayache (WBIR, 2003)

A Parallel Implementation of Non-rigid Registration Using a Volumetric Biomechanical Model. - Maxime Sermesant; Olivier Clatz; Zhongze Li; Stéphane Lanteri; Hervé Delingette; Nicholas Ayache (WBIR, 2003)

Non-linear anisotropic elasticity for real-time surgery simulation. - Guillaume Picinbono; Hervé Delingette; Nicholas Ayache (Graph. Model., 2003)

Iconic feature based nonrigid registration: the PASHA algorithm. - Pascal Cachier; Éric Bardinet; Didier Dormont; Xavier Pennec; Nicholas Ayache (Comput. Vis. Image Underst., 2003)

Deformable biomechanical models: Application to 4D cardiac image analysis. - Maxime Sermesant; Clement Forest; Xavier Pennec; Hervé Delingette; Nicholas Ayache (Medical Image Anal., 2003)

Anisotropic filtering for model-based segmentation of 4D cylindrical echocardiographic images. - Johan Montagnat; Maxime Sermesant; Hervé Delingette; Grégoire Malandain; Nicholas Ayache (Pattern Recognit. Lett., 2003)

Tracking brain deformations in time sequences of 3D US images. - Xavier Pennec; Pascal Cachier; Nicholas Ayache (Pattern Recognit. Lett., 2003)

Epidaure: A Research Project in Medical Image Analysis, Simulation and Robotics at INRIA. - Nicholas Ayache (IEEE Trans. Medical Imaging, 2003)

Retrospective Evaluation of Inter-subject Brain Registration. - Pierre Hellier; Christian Barillot; Isabelle Corouge; Bernard Gibaud; Georges Le Goualher; D. Louis Collins; Alan C. Evans; Grégoire Malandain; Nicholas Ayache; Gary E. Christensen; Hans J. Johnson (IEEE Trans. Medical Imaging, 2003)

An Accuracy Certified Augmented Reality System for Therapy Guidance. - Stéphane Nicolau; Xavier Pennec; Luc Soler; Nicholas Ayache (ECCV (3), 2004)

Hierarchical Segmentation of Multiple Sclerosis Lesions in Multi-Sequence MRI. - Guillaume Dugas-Phocion; Miguel Ángel González Ballester; Grégoire Malandain; Nicholas Ayache; Christine Lebrun; Stéphane Chanalet; Caroline Bensa (ISBI, 2004)

Measuring Blood Cells Velocity in Microvessels from a Single Image: Application to In Vivo and In Situ Confocal Microscopy. - Nicolas Savoire; Georges Le Goualher; Aymeric Perchant; François Lacombe; Grégoire Malandain; Nicholas Ayache (ISBI, 2004)

Virtual Reality and Augmented Reality in Digestive Surgery. - Luc Soler; Stéphane Nicolau; Jérôme Schmid; Christophe Koehl; Jacques Marescaux; Xavier Pennec; Nicholas Ayache (ISMAR, 2004)

Surface Contact and Reaction Force Models for Laparoscopic Simulation. - Clement Forest; Hervé Delingette; Nicholas Ayache (ISMS, 2004)

An Augmented Reality & Virtuality Interface for a Puncture Guidance System: Design and Validation on an Abdominal Phantom. - Stéphane Nicolau; Jérôme Schmid; Xavier Pennec; Luc Soler; Nicholas Ayache (MIAR, 2004)

In Silico Tumor Growth: Application to Glioblastomas. - Olivier Clatz; Pierre-Yves Bondiau; Hervé Delingette; Grégoire Malandain; Maxime Sermesant; Simon K. Warfield; Nicholas Ayache (MICCAI (2), 2004)

Improved EM-Based Tissue Segmentation and Partial Volume Effect Quantification in Multi-sequence Brain MRI. - Guillaume Dugas-Phocion; Miguel Ángel González Ballester; Grégoire Malandain; Christine Lebrun; Nicholas Ayache (MICCAI (1), 2004)

Towards Optical Biopsies with an Integrated Fibered Confocal Fluorescence Microscope. - Georges Le Goualher; Aymeric Perchant; Magalie Genet; Charlotte Cavé; Bertrand Viellerobe; Frederic Berier; Benjamin Abrat; Nicholas Ayache (MICCAI (2), 2004)

Non-rigid Atlas to Subject Registration with Pathologies for Conformal Brain Radiotherapy. - Radu Stefanescu; Olivier Commowick; Grégoire Malandain; Pierre-Yves Bondiau; Nicholas Ayache; Xavier Pennec (MICCAI (1), 2004)

Automatic Classification of SPECT Images of Alzheimer's Disease Patients and Control Subjects. - Jonathan Stoeckel; Nicholas Ayache; Grégoire Malandain; Pierre Malick Koulibaly; Klaus P. Ebmeier; Jacques Darcourt (MICCAI (2), 2004)

Isotropic Energies, Filters and Splines for Vector Field Regularization. - Pascal Cachier; Nicholas Ayache (J. Math. Imaging Vis., 2004)

Reviewers - an acknowledgement. - Nicholas Ayache (Medical Image Anal., 2004)

Editorial 2004. - Nicholas Ayache; Jim Duncan 001 (Medical Image Anal., 2004)

Generalized image models and their application as statistical models of images. - Miguel Ángel González Ballester; Xavier Pennec; Marius George Linguraru; Nicholas Ayache (Medical Image Anal., 2004)

Grid powered nonlinear image registration with locally adaptive regularization. - Radu Stefanescu; Xavier Pennec; Nicholas Ayache (Medical Image Anal., 2004)

Grid-Enabled Non-Rigid Registration Of Medical Images. - Radu Stefanescu; Xavier Pennec; Nicholas Ayache (Parallel Process. Lett., 2004)

Non-linear 2D and 3D Registration Using Block-Matching and B-Splines. - Heike Hufnagel; Xavier Pennec; Grégoire Malandain; Heinz Handels; Nicholas Ayache (Bildverarbeitung für die Medizin, 2005)

Computational Anatomy and Computational Physiology for Medical Image Analysis. - Nicholas Ayache (CVBIA, 2005)

A Riemannian Framework for the Processing of Tensor-Valued Images. - Pierre Fillard; Vincent Arsigny; Nicholas Ayache; Xavier Pennec (DSSCV, 2005)

Estimating Local Apparent Conductivity with a 2-D Electrophysiological Model of the Heart. - Valérie Moreau-Villéger; Hervé Delingette; Maxime Sermesant; Hiroshi Ashikaga; Owen Faris; Elliot R. McVeigh; Nicholas Ayache (FIMH, 2005)

Integrating Tactile and Force Feedback with Finite Element Models. - Christopher R. Wagner; Douglas P. Perrin; Ross L. Feller; Robert D. Howe; Olivier Clatz; Hervé Delingette; Nicholas Ayache (ICRA, 2005)

Extrapolation of Sparse Tensor Fields: Application to the Modeling of Brain Variability. - Pierre Fillard; Vincent Arsigny; Xavier Pennec; Paul M. Thompson; Nicholas Ayache (IPMI, 2005)

Fast and Simple Calculus on Tensors in the Log-Euclidean Framework. - Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache (MICCAI, 2005)

Retrospective Cross-Evaluation of an Histological and Deformable 3D Atlas of the Basal Ganglia on Series of Parkinsonian Patients Treated by Deep Brain Stimulation. - Éric Bardinet; Didier Dormont; Grégoire Malandain; Manik Bhattacharjee; Bernard Pidoux; Christian Saleh; Philippe Cornu; Nicholas Ayache; Yves Agid; Jérôme Yelnik (MICCAI (2), 2005)

Hybrid Formulation of the Model-Based Non-rigid Registration Problem to Improve Accuracy and Robustness. - Olivier Clatz; Hervé Delingette; Ion-Florin Talos; Alexandra J. Golby; Ron Kikinis; Ferenc A. Jolesz; Nicholas Ayache; Simon K. Warfield (MICCAI (2), 2005)

Incorporating Statistical Measures of Anatomical Variability in Atlas-to-Subject Registration for Conformal Brain Radiotherapy. - Olivier Commowick; Radu Stefanescu; Pierre Fillard; Vincent Arsigny; Nicholas Ayache; Xavier Pennec; Grégoire Malandain (MICCAI (2), 2005)

New Ratios for the Detection and Classification of CJD in Multisequence MRI of the Brain. - Marius George Linguraru; Nicholas Ayache; Miguel Ángel González Ballester; Éric Bardinet; Damien Galanaud; Stéphane Haïk; Baptiste Faucheux; Patrick Cozzone; Didier Dormont; Jean-Philippe Brandel (MICCAI (2), 2005)

A Complete Augmented Reality Guidance System for Liver Punctures: First Clinical Evaluation. - Stéphane Nicolau; Xavier Pennec; Luc Soler; Nicholas Ayache (MICCAI, 2005)

Riemannian Elasticity: A Statistical Regularization Framework for Non-linear Registration. - Xavier Pennec; Radu Stefanescu; Vincent Arsigny; Pierre Fillard; Nicholas Ayache (MICCAI (2), 2005)

Mosaicing of Confocal Microscopic In Vivo Soft Tissue Video Sequences. - Tom Vercauteren; Aymeric Perchant; Xavier Pennec; Nicholas Ayache (MICCAI, 2005)

On the adequacy of principal factor analysis for the study of shape variability. - Miguel Ángel González Ballester; Marius George Linguraru; Mauricio Reyes Aguirre; Nicholas Ayache (Image Processing, 2005)

Hepatic surgery simulation. - Hervé Delingette; Nicholas Ayache (Commun. ACM, 2005)

An augmented reality system to guide radio-frequency tumour ablation. - Stéphane Nicolau; Alain Garcia; Xavier Pennec; Luc Soler; Nicholas Ayache (Comput. Animat. Virtual Worlds, 2005)

Polyrigid and polyaffine transformations: A novel geometrical tool to deal with non-rigid deformations - Application to the registration of histological slices. - Vincent Arsigny; Xavier Pennec; Nicholas Ayache (Medical Image Anal., 2005)

Removing tetrahedra from manifold tetrahedralisation: application to real-time surgical simulation. - Clement Forest; Hervé Delingette; Nicholas Ayache (Medical Image Anal., 2005)

Simulation of cardiac pathologies using an electromechanical biventricular model and XMR interventional imaging. - Maxime Sermesant; Kawal S. Rhode; Gerardo I. Sanchez-Ortiz; Oscar Camara 001; R. Andriantsimiavona; Sanjeet Hegde; Daniel Rueckert; Pier Lambiase; Clifford Bucknall; Eric Rosenthal; Herve Delingette; Derek L. G. Hill; et al. (Medical Image Anal., 2005)

Robust nonrigid registration to capture brain shift from intraoperative MRI. - Olivier Clatz; Hervé Delingette; Ion-Florin Talos; Alexandra J. Golby; Ron Kikinis; Ferenc A. Jolesz; Nicholas Ayache; Simon K. Warfield (IEEE Trans. Medical Imaging, 2005)

Realistic simulation of the 3-D growth of brain tumors in MR images coupling diffusion with biomechanical deformation. - Olivier Clatz; Maxime Sermesant; Pierre-Yves Bondiau; Hervé Delingette; Simon K. Warfield; Grégoire Malandain; Nicholas Ayache (IEEE Trans. Medical Imaging, 2005)

Principal Spine Shape Deformation Modes Using Riemannian Geometry and Articulated Models. - Jonathan Boisvert; Xavier Pennec; Hubert Labelle; Farida Cheriet; Nicholas Ayache (AMDO, 2006)

An interactive hybrid non-rigid registration framework for 3D medical images. - Antoine Azar; Chenyang Xu 001; Xavier Pennec; Nicholas Ayache (ISBI, 2006)

3D anatomical variability assessment of the scoliotic spine using statistics on Lie groups. - Jonathan Boisvert; Xavier Pennec; Nicholas Ayache; Hubert Labelle; Farida Cheriet (ISBI, 2006)

An efficient locally affine framework for the registration of anatomical structures. - Olivier Commowick; Vincent Arsigny; María Jimena Costa; Nicholas Ayache; Grégoire Malandain (ISBI, 2006)

A Log-Euclidean Framework for Statistics on Diffeomorphisms. - Vincent Arsigny; Olivier Commowick; Xavier Pennec; Nicholas Ayache (MICCAI (1), 2006)

Extrapolating Tumor Invasion Margins for Physiologically Determined Radiotherapy Regions. - Ender Konukoglu; Olivier Clatz; Pierre-Yves Bondiau; Hervé Delingette; Nicholas Ayache (MICCAI (1), 2006)

Towards a Statistical Atlas of Cardiac Fiber Structure. - Jean-Marc Peyrat; Maxime Sermesant; Xavier Pennec; Hervé Delingette; Chenyang Xu 001; Elliot R. McVeigh; Nicholas Ayache (MICCAI (1), 2006)

A Log-Euclidean Polyaffine Framework for Locally Rigid or Affine Registration. - Vincent Arsigny; Olivier Commowick; Xavier Pennec; Nicholas Ayache (WBIR, 2006)

A Riemannian Framework for Tensor Computing. - Xavier Pennec; Pierre Fillard; Nicholas Ayache (Int. J. Comput. Vis., 2006)

Robust mosaicing with correction of motion distortions and tissue deformations for in vivo fibered microscopy. - Tom Vercauteren; Aymeric Perchant; Grégoire Malandain; Xavier Pennec; Nicholas Ayache (Medical Image Anal., 2006)

Computational Models for Image-Guided Robot-Assisted and Simulated Medical Interventions. - Hervé Delingette; Xavier Pennec; Luc Soler; Jacques Marescaux; Nicholas Ayache (Proc. IEEE, 2006)

Geometric Means in a Novel Vector Space Structure on Symmetric Positive-Definite Matrices. - Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache (SIAM J. Matrix Anal. Appl., 2006)

Building maps of local apparent conductivity of the epicardium with a 2-D electrophysiological model of the heart. - Valérie Moreau-Villéger; Hervé Delingette; Maxime Sermesant; Hiroshi Ashikaga; Elliot R. McVeigh; Nicholas Ayache (IEEE Trans. Biomed. Eng., 2006)

Reconstruction of coronary arteries from a single rotational X-ray projection sequence. - Christophe Blondel; Grégoire Malandain; Régis Vaillant; Nicholas Ayache (IEEE Trans. Medical Imaging, 2006)

Differentiation of sCJD and vCJD forms by automated analysis of basal ganglia intensity distribution in multisequence MRI of the brain-definition and evaluation of new MRI-based ratios. - Marius George Linguraru; Nicholas Ayache; Éric Bardinet; Miguel Ángel González Ballester; Damien Galanaud; Stéphane Haïk; Baptiste Faucheux; J.-J. Hauw; Patrick Cozzone; Didier Dormont; Jean-Philippe Brandel (IEEE Trans. Medical Imaging, 2006)

An electromechanical model of the heart for image analysis and simulation. - Maxime Sermesant; Hervé Delingette; Nicholas Ayache (IEEE Trans. Medical Imaging, 2006)

Point-Based Statistical Shape Models with Probabilistic Correspondences and Affine EM-ICP. - Heike Hufnagel; Xavier Pennec; Jan Ehrhardt; Heinz Handels; Nicholas Ayache (Bildverarbeitung für die Medizin, 2007)

Statistical Comparison of Cardiac Fibre Architectures. - Jean-Marc Peyrat; Maxime Sermesant; Xavier Pennec; Hervé Delingette; Chenyang Xu 001; Elliot R. McVeigh; Nicholas Ayache (FIMH, 2007)

An Anisotropic Multi-front Fast Marching Method for Real-Time Simulation of Cardiac Electrophysiology. - Maxime Sermesant; Ender Konukoglu; Hervé Delingette; Yves Coudière; Phani Chinchapatnam; Kawal S. Rhode; Reza Razavi; Nicholas Ayache (FIMH, 2007)

A Recursive Anisotropic Fast Marching Approach to Reaction Diffusion Equation: Application to Tumor Growth Modeling. - Ender Konukoglu; Maxime Sermesant; Olivier Clatz; Jean-Marc Peyrat; Hervé Delingette; Nicholas Ayache (IPMI, 2007)

Insight into Efficient Image Registration Techniques and the Demons Algorithm. - Tom Vercauteren; Xavier Pennec; Ezio Malis; Aymeric Perchant; Nicholas Ayache (IPMI, 2007)

Automatic Segmentation of the Bladder Using Deformable Models. - María Jimena Costa; Hervé Delingette; Nicholas Ayache (ISBI, 2007)

Cardiosense3d: Patient-Specific Cardiac Simulation. - Hervé Delingette; Maxime Sermesant; Jean-Marc Peyrat; Nicholas Ayache; Kawal S. Rhode; Reza Razavi; Elliot R. McVeigh; Dominique Chapelle; Jacques Sainte-Marie; Philippe Moireau; Miguel A. Fernández; Jean-Frédéric Gerbeau; et al. (ISBI, 2007)

Region Tracking Algorithms on Laser Scanning Devices Applied to Cell Traffic Analysis. - Aymeric Perchant; Tom Vercauteren; Fabien Oberrietter; Nicolas Savoire; Nicholas Ayache (ISBI, 2007)

Statistical Shape Analysis via Principal Factor Analysis. - Mauricio Reyes 001; Marius George Linguraru; Kostas Marias; Nicholas Ayache; Lutz-Peter Nolte; Miguel Ángel González Ballester (ISBI, 2007)

Automatic Segmentation of Bladder and Prostate Using Coupled 3D Deformable Models. - María Jimena Costa; Hervé Delingette; Sébastien Novellas; Nicholas Ayache (MICCAI (1), 2007)

Measuring Brain Variability Via Sulcal Lines Registration: A Diffeomorphic Approach. - Stanley Durrleman; Xavier Pennec; Alain Trouvé; Nicholas Ayache (MICCAI (1), 2007)

Shape Analysis Using a Point-Based Statistical Shape Model Built on Correspondence Probabilities. - Heike Hufnagel; Xavier Pennec; Jan Ehrhardt; Heinz Handels; Nicholas Ayache (MICCAI (1), 2007)

Towards an Identification of Tumor Growth Parameters from Time Series of Images. - Ender Konukoglu; Olivier Clatz; Pierre-Yves Bondiau; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (MICCAI (1), 2007)

Clinical Evaluation of a Respiratory Gated Guidance System for Liver Punctures. - Stéphane Nicolau; Xavier Pennec; Luc Soler; Nicholas Ayache (MICCAI (2), 2007)

Non-parametric Diffeomorphic Image Registration with the Demons Algorithm. - Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache (MICCAI (2), 2007)

Computational Brain Tumours. - Olivier Clatz; Ender Konukoglu; Pierre-Yves Bondiau; Simon K. Warfield; Hervé Delingette; Nicholas Ayache (ERCIM News, 2007)

CardioSense3D. - Hervé Delingette; Maxime Sermesant; Nicholas Ayache; Dominique Chapelle; Miguel A. Fernández; Jean-Frédéric Gerbeau; Michel Sorine (ERCIM News, 2007)

The Digital Patient - Introduction to the special theme. - Ioannis G. Tollis; Nicholas Ayache (ERCIM News, 2007)

In Vivo Microscopy for Real-Time Structural and Functional Cellular Imaging. - Tom Vercauteren; Aymeric Perchant; Nicholas Ayache (ERCIM News, 2007)

Deformable Atlases for the Segmentation of Internal Brain Nuclei in Magnetic Resonance Imaging. - Marius George Linguraru; Miguel Ángel González Ballester; Nicholas Ayache (Int. J. Comput. Commun. Control, 2007)

Measuring brain variability by extrapolating sparse tensor fields measured on sulcal lines. - Pierre Fillard; Vincent Arsigny; Xavier Pennec; Kiralee M. Hayashi; Paul M. Thompson; Nicholas Ayache (NeuroImage, 2007)

A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data. - Jérôme Yelnik; Éric Bardinet; Didier Dormont; Grégoire Malandain; Sébastien Ourselin; Dominique Tandé; Carine Karachi; Nicholas Ayache; Philippe Cornu; Yves Agid (NeuroImage, 2007)

Dynamic Model of Communicating Hydrocephalus for Surgery Simulation. - Olivier Clatz; Stéphane Litrico; Hervé Delingette; Philippe Paquis; Nicholas Ayache (IEEE Trans. Biomed. Eng., 2007)

Clinical DT-MRI Estimation, Smoothing, and Fiber Tracking With Log-Euclidean Metrics. - Pierre Fillard; Xavier Pennec; Vincent Arsigny; Nicholas Ayache (IEEE Trans. Medical Imaging, 2007)

A Computational Framework for the Statistical Analysis of Cardiac Diffusion Tensors: Application to a Small Database of Canine Hearts. - Jean-Marc Peyrat; Maxime Sermesant; Xavier Pennec; Hervé Delingette; Chenyang Xu 001; Elliot R. McVeigh; Nicholas Ayache (IEEE Trans. Medical Imaging, 2007)

A Global Criterion for the Computation of Statistical Shape Model Parameters Based on Correspondence Probabilities. - Heike Hufnagel; Xavier Pennec; Jan Ehrhardt; Nicholas Ayache; Heinz Handels (Bildverarbeitung für die Medizin, 2008)

Monitoring slowly evolving tumors. - Ender Konukoglu; William M. Wells III; Sébastien Novellas; Nicholas Ayache; Ron Kikinis; Peter M. Black; Kilian M. Pohl (ISBI, 2008)

A new evaluation of the brain parenchymal fraction: Application in multiple sclerosis longitudinal studies. - Jean-Christophe Souplet; Christine Lebrun; Nicholas Ayache; Grégoire Malandain (ISBI, 2008)

DTI registration with exact finite-strain differential. - B. T. Thomas Yeo; Tom Vercauteren; Pierre Fillard; Xavier Pennec; Polina Golland; Nicholas Ayache; Olivier Clatz (ISBI, 2008)

Sparse Approximation of Currents for Statistics on Curves and Surfaces. - Stanley Durrleman; Xavier Pennec; Alain Trouvé; Nicholas Ayache (MICCAI (2), 2008)

Cardiac Electrophysiology Model Adjustment Using the Fusion of MR and Optical Imaging. - Damien Lepiller; Maxime Sermesant; Mihaela Pop; Hervé Delingette; Graham A. Wright; Nicholas Ayache (MICCAI (1), 2008)

Registration of 4D Time-Series of Cardiac Images with Multichannel Diffeomorphic Demons. - Jean-Marc Peyrat; Hervé Delingette; Maxime Sermesant; Xavier Pennec; Chenyang Xu 001; Nicholas Ayache (MICCAI (2), 2008)

Symmetric Log-Domain Diffeomorphic Registration: A Demons-Based Approach. - Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache (MICCAI (1), 2008)

Spherical Demons: Fast Surface Registration. - B. T. Thomas Yeo; Mert R. Sabuncu; Tom Vercauteren; Nicholas Ayache; Bruce Fischl; Polina Golland (MICCAI (1), 2008)

Comparison of statistical shape models built on correspondence probabilities and one-to-one correspondences. - Heike Hufnagel; Xavier Pennec; Jan Ehrhardt; Nicholas Ayache; Heinz Handels (Image Processing, 2008)

An Integrated Platform for Dynamic Cardiac Simulation and Image Processing: Application to Personalised Tetralogy of Fallot Simulation. - Nicolas Toussaint; Tommaso Mansi; Hervé Delingette; Nicholas Ayache; Maxime Sermesant (VCBM, 2008)

Computational Models of the Human Body for Medical Image Analysis. - Nicholas Ayache (VECPAR, 2008)

Generation of a statistical shape model with probabilistic point correspondences and the expectation maximization- iterative closest point algorithm. - Heike Hufnagel; Xavier Pennec; Jan Ehrhardt; Nicholas Ayache; Heinz Handels (Int. J. Comput. Assist. Radiol. Surg., 2008)

An efficient locally affine framework for the smooth registration of anatomical structures. - Olivier Commowick; Vincent Arsigny; A. Isambert; J. Costa; F. Dhermain; F. Bidault; Pierre-Yves Bondiau; Nicholas Ayache; Grégoire Malandain (Medical Image Anal., 2008)

Inferring brain variability from diffeomorphic deformations of currents: An integrative approach. - Stanley Durrleman; Xavier Pennec; Alain Trouvé; Paul M. Thompson; Nicholas Ayache (Medical Image Anal., 2008)

Editorial. - Sébastien Ourselin; Nicholas Ayache (Medical Image Anal., 2008)

Articulated Spine Models for 3-D Reconstruction From Partial Radiographic Data. - Jonathan Boisvert; Farida Cheriet; Xavier Pennec; Hubert Labelle; Nicholas Ayache (IEEE Trans. Biomed. Eng., 2008)

Geometric Variability of the Scoliotic Spine Using Statistics on Articulated Shape Models. - Jonathan Boisvert; Farida Cheriet; Xavier Pennec; Hubert Labelle; Nicholas Ayache (IEEE Trans. Medical Imaging, 2008)

Virtual Pulmonary Valve Replacement Interventions with a Personalised Cardiac Electromechanical Model. - Tommaso Mansi; Barbara André; Michael Lynch; Maxime Sermesant; Hervé Delingette; Younes Boudjemline; Nicholas Ayache (Recent Advances in the 3D Physiological Human, 2009)

Cardiac Motion Recovery and Boundary Conditions Estimation by Coupling an Electromechanical Model and Cine-MRI Data. - Florence Billet; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (FIMH, 2009)

Physically-Constrained Diffeomorphic Demons for the Estimation of 3D Myocardium Strain from Cine-MRI. - Tommaso Mansi; Jean-Marc Peyrat; Maxime Sermesant; Hervé Delingette; Julie Blanc; Younes Boudjemline; Nicholas Ayache (FIMH, 2009)

Characterization of Post-infarct Scars in a Porcine Model - A Combined Experimental and Theoretical Study. - Mihaela Pop; Maxime Sermesant; Tommaso Mansi; Eugene Crystal; Jay Detsky; Yuesong Yang; Paul Fefer; Elliot R. McVeigh; Alexander Dick; Nicholas Ayache; Graham A. Wright (FIMH, 2009)

Personalised Electromechanical Model of the Heart for the Prediction of the Acute Effects of Cardiac Resynchronisation Therapy. - Maxime Sermesant; Florence Billet; Radomír Chabiniok; Tommaso Mansi; Phani Chinchapatnam; Philippe Moireau; Jean-Marc Peyrat; Kawal S. Rhode; Matthew Ginks; Pier Lambiase; Simon R. Arridge; Hervé Delingette; et al. (FIMH, 2009)

A Statistical Model of White Matter Fiber Bundles Based on Currents. - Stanley Durrleman; Pierre Fillard; Xavier Pennec; Alain Trouvé; Nicholas Ayache (IPMI, 2009)

Endomicroscopic Image Retrieval and Classification Using Invariant Visual Features. - Barbara André; Tom Vercauteren; Aymeric Perchant; Anna M. Buchner; Michael B. Wallace; Nicholas Ayache (ISBI, 2009)

Quantitative Comparison of Two Cardiac Electrophysiology Models Using Personalisation to Optical and MR Data. - Jatin Relan; Maxime Sermesant; Herve Delingette; Mihaela Pop; Graham A. Wright; Nicholas Ayache (ISBI, 2009)

Introducing Space and Time in Local Feature-Based Endomicroscopic Image Retrieval. - Barbara André; Tom Vercauteren; Aymeric Perchant; Anna M. Buchner; Michael B. Wallace; Nicholas Ayache (MCBR-CDS, 2009)

Spatiotemporal Atlas Estimation for Developmental Delay Detection in Longitudinal Datasets. - Stanley Durrleman; Xavier Pennec; Alain Trouvé; Guido Gerig; Nicholas Ayache (MICCAI (1), 2009)

A Statistical Model of Right Ventricle in Tetralogy of Fallot for Prediction of Remodelling and Therapy Planning. - Tommaso Mansi; Stanley Durrleman; Boris C. Bernhardt; Maxime Sermesant; Hervé Delingette; Ingmar Voigt; Philipp Lurz; Andrew Mayall Taylor; Julie Blanc; Younes Boudjemline; Xavier Pennec; Nicholas Ayache (MICCAI (1), 2009)

3D reconstruction of the human spine from radiograph(s) using a multi-body statistical model. - Jonathan Boisvert; Farida Cheriet; Xavier Pennec; Nicholas Ayache (Image-Guided Procedures, 2009)

Editorial: Special Issue on Medical Robotics. - Jaydev P. Desai; Nicholas Ayache (Int. J. Robotics Res., 2009)

A Fast and Log-Euclidean Polyaffine Framework for Locally Linear Registration. - Vincent Arsigny; Olivier Commowick; Nicholas Ayache; Xavier Pennec (J. Math. Imaging Vis., 2009)

Statistical models of sets of curves and surfaces based on currents. - Stanley Durrleman; Xavier Pennec; Alain Trouvé; Nicholas Ayache (Medical Image Anal., 2009)

An augmented reality system for liver thermal ablation: Design and evaluation on clinical cases. - Stéphane Nicolau; Xavier Pennec; Luc Soler; Xavier Buy; Afshin Gangi; Nicholas Ayache; Jacques Marescaux (Medical Image Anal., 2009)

Fusion of optical imaging and MRI for the evaluation and adjustment of macroscopic models of cardiac electrophysiology: A feasibility study. - Mihaela Pop; Maxime Sermesant; Damien Lepiller; Michael V. Truong; Elliot R. McVeigh; Eugene Crystal; Alexander Dick; Herve Delingette; Nicholas Ayache; Graham A. Wright (Medical Image Anal., 2009)

Diffeomorphic demons: Efficient non-parametric image registration. - Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache (NeuroImage, 2009)

DT-REFinD: Diffusion Tensor Registration With Exact Finite-Strain Differential. - B. T. Thomas Yeo; Tom Vercauteren; Pierre Fillard; Jean-Marc Peyrat; Xavier Pennec; Polina Golland; Nicholas Ayache; Olivier Clatz (IEEE Trans. Medical Imaging, 2009)

Endomicroscopic video retrieval using mosaicing and visual words. - Barbara André; Tom Vercauteren; Anna M. Buchner; Michael B. Wallace; Nicholas Ayache (ISBI, 2010)

An Image Retrieval Approach to Setup Difficulty Levels in Training Systems for Endomicroscopy Diagnosis. - Barbara André; Tom Vercauteren; Anna M. Buchner; Muhammad Waseem Shahid; Michael B. Wallace; Nicholas Ayache (MICCAI (2), 2010)

Spatial Decision Forests for MS Lesion Segmentation in Multi-Channel MR Images. - Ezequiel Geremia; Bjoern H. Menze; Olivier Clatz; Ender Konukoglu; Antonio Criminisi; Nicholas Ayache (MICCAI (1), 2010)

LogDemons Revisited: Consistent Regularisation and Incompressibility Constraint for Soft Tissue Tracking in Medical Images. - Tommaso Mansi; Xavier Pennec; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (MICCAI (2), 2010)

A Generative Model for Brain Tumor Segmentation in Multi-Modal Images. - Bjoern H. Menze; Koenraad Van Leemput; Danial Lashkari; Marc-André Weber; Nicholas Ayache; Polina Golland (MICCAI (2), 2010)

Non-invasive Activation Times Estimation Using 3D Echocardiography. - Adityo Prakosa; Maxime Sermesant; Hervé Delingette; Eric Saloux; Pascal Allain; Pascal Cathier; Patrick Etyngier; Nicolas Villain; Nicholas Ayache (STACOM/CESC, 2010)

Coupled Personalisation of Electrophysiology Models for Simulation of Induced Ischemic Ventricular Tachycardia. - Jatin Relan; Phani Chinchapatnam; Maxime Sermesant; Kawal S. Rhode; Herve Delingette; Reza Razavi; Nicholas Ayache (MICCAI (2), 2010)

Estimation of Reaction, Diffusion and Restitution Parameters for a 3D Myocardial Model Using Optical Mapping and MRI. - Jatin Relan; Mihaela Pop; Hervé Delingette; Graham A. Wright; Nicholas Ayache; Maxime Sermesant (STACOM/CESC, 2010)

Cardiac Motion Estimation Using a ProActive Deformable Model: Evaluation and Sensitivity Analysis. - Ken C. L. Wong; Florence Billet; Tommaso Mansi; Radomír Chabiniok; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (STACOM/CESC, 2010)

Certifying cost annotations in compilers - Roberto M. Amadio; Nicholas Ayache; Yann Régis-Gianas; Ronan Saillard (CoRR, 2010)

Extrapolating glioma invasion margin in brain magnetic resonance images: Suggesting new irradiation margins. - Ender Konukoglu; Olivier Clatz; Pierre-Yves Bondiau; Hervé Delingette; Nicholas Ayache (Medical Image Anal., 2010)

Image Guided Personalization of Reaction-Diffusion Type Tumor Growth Models Using Modified Anisotropic Eikonal Equations. - Ender Konukoglu; Olivier Clatz; Bjoern H. Menze; Bram Stieltjes; Marc-André Weber; Emmanuel Mandonnet; Herve Delingette; Nicholas Ayache (IEEE Trans. Medical Imaging, 2010)

Registration of 4D Cardiac CT Sequences Under Trajectory Constraints With Multichannel Diffeomorphic Demons. - Jean-Marc Peyrat; Herve Delingette; Maxime Sermesant; Chenyang Xu 001; Nicholas Ayache (IEEE Trans. Medical Imaging, 2010)

Spherical Demons: Fast Diffeomorphic Landmark-Free Surface Registration. - B. T. Thomas Yeo; Mert R. Sabuncu; Tom Vercauteren; Nicholas Ayache; Bruce Fischl; Polina Golland (IEEE Trans. Medical Imaging, 2010)

Statistical Analysis of the Human Cardiac Fiber Architecture from DT-MRI. - Herve Lombaert; Jean-Marc Peyrat; Pierre Croisille; Stanislas Rapacchi; Laurent Fanton; Patrick Clarysse; Herve Delingette; Nicholas Ayache (FIMH, 2011)

A 3D MRI-Based Cardiac Computer Model to Study Arrhythmia and Its In-vivo Experimental Validation. - Mihaela Pop; Maxime Sermesant; Jean-Marc Peyrat; Eugene Crystal; Sudip Ghate; Tommaso Mansi; Ilan Lashevsky; Beiping Qiang; Elliot R. McVeigh; Nicholas Ayache; Graham A. Wright (FIMH, 2011)

Schild's Ladder for the Parallel Transport of Deformations in Time Series of Images. - Marco Lorenzi; Nicholas Ayache; Xavier Pennec (IPMI, 2011)

A Generative Approach for Image-Based Modeling of Tumor Growth. - Bjoern H. Menze; Koen Van Leemput; Antti Honkela; Ender Konukoglu; Marc-André Weber; Nicholas Ayache; Polina Golland (IPMI, 2011)

Complexity of cerebral atrophy evaluation in relapsing-remitting multiple sclerosis context. - Jean-Christophe Souplet; M. Cohen; Christine Lebrun; Nicholas Ayache; Grégoire Malandain (ISBI, 2011)

Content-Based Retrieval in Endomicroscopy: Toward an Efficient Smart Atlas for Clinical Diagnosis. - Barbara André; Tom Vercauteren; Nicholas Ayache (MCBR-CDS, 2011)

Retrieval Evaluation and Distance Learning from Perceived Similarity between Endomicroscopy Videos. - Barbara André; Tom Vercauteren; Anna M. Buchner; Michael B. Wallace; Nicholas Ayache (MICCAI (3), 2011)

Variability of the Human Cardiac Laminar Structure. - Herve Lombaert; Jean-Marc Peyrat; Laurent Fanton; Farida Cheriet; Hervé Delingette; Nicholas Ayache; Patrick Clarysse; Isabelle E. Magnin; Pierre Croisille (STACOM, 2011)

Statistical Atlas of Human Cardiac Fibers: Comparison with Abnormal Hearts. - Herve Lombaert; Jean-Marc Peyrat; Laurent Fanton; Farida Cheriet; Hervé Delingette; Nicholas Ayache; Patrick Clarysse; Isabelle E. Magnin; Pierre Croisille (STACOM, 2011)

Mapping the Effects of Aβ 1 - 42 Levels on the Longitudinal Changes in Healthy Aging: Hierarchical Modeling Based on Stationary Velocity Fields. - Marco Lorenzi; Nicholas Ayache; Giovanni B. Frisoni; Xavier Pennec (MICCAI (2), 2011)

Layered Spatio-temporal Forests for Left Ventricle Segmentation from 4D Cardiac MRI Data. - Ján Margeta; Ezequiel Geremia; Antonio Criminisi; Nicholas Ayache (STACOM, 2011)

EP Challenge - STACOM'11: Forward Approaches to Computational Electrophysiology Using MRI-Based Models and In-Vivo CARTO Mapping in Swine Hearts. - Mihaela Pop; Maxime Sermesant; Tommaso Mansi; Eugene Crystal; Sudip Ghate; Jatin Relan; Charles Pierre; Yves Coudière; Jennifer Barry; Ilan Lashevsky; Beiping Qiang; Elliot R. McVeigh; et al. (STACOM, 2011)

Synthetic Echocardiographic Image Sequences for Cardiac Inverse Electro-Kinematic Learning. - Adityo Prakosa; Maxime Sermesant; Hervé Delingette; Eric Saloux; Pascal Allain; Pascal Cathier; Patrick Etyngier; Nicolas Villain; Nicholas Ayache (MICCAI (1), 2011)

Personalisation of a 3D Ventricular Electrophysiological Model, Using Endocardial and Epicardial Contact Mapping and MRI. - Jatin Relan; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (STACOM, 2011)

A multi-front eikonal model of cardiac electrophysiology for interactive simulation of radio-frequency ablation. - Erik Pernod; Maxime Sermesant; Ender Konukoglu; Jatin Relan; Herve Delingette; Nicholas Ayache (Comput. Graph., 2011)

iLogDemons: A Demons-Based Registration Algorithm for Tracking Incompressible Elastic Biological Tissues. - Tommaso Mansi; Xavier Pennec; Maxime Sermesant; Hervé Delingette; Nicholas Ayache (Int. J. Comput. Vis., 2011)

A smart atlas for endomicroscopy using automated video retrieval. - Barbara André; Tom Vercauteren; Anna M. Buchner; Michael B. Wallace; Nicholas Ayache (Medical Image Anal., 2011)

Registration, atlas estimation and variability analysis of white matter fiber bundles modeled as currents. - Stanley Durrleman; Pierre Fillard; Xavier Pennec; Alain Trouvé; Nicholas Ayache (NeuroImage, 2011)

Spatial decision forests for MS lesion segmentation in multi-channel magnetic resonance images. - Ezequiel Geremia; Olivier Clatz; Bjoern H. Menze; Ender Konukoglu; Antonio Criminisi; Nicholas Ayache (NeuroImage, 2011)

Certified Complexity. - R. Armadio; Andrea Asperti; Nicholas Ayache; Brian Campbell 001; Dominic P. Mulligan; Randy Pollack; Yann Régis-Gianas; Claudio Sacerdoti Coen; Ian Stark (FET, 2011)

Correspondence Between Simple 3-D MRI-Based Computer Models and In-Vivo EP Measurements in Swine With Chronic Infarctions. - Mihaela Pop; Maxime Sermesant; Tommaso Mansi; Eugene Crystal; Sudip Ghate; Jean-Marc Peyrat; Ilan Lashevsky; Beiping Qiang; Elliot R. McVeigh; Nicholas Ayache; Graham A. Wright (IEEE Trans. Biomed. Eng., 2011)

Personalization of a Cardiac Electrophysiology Model Using Optical Mapping and MRI for Prediction of Changes With Pacing. - Jatin Relan; Mihaela Pop; Hervé Delingette; Graham A. Wright; Nicholas Ayache; Maxime Sermesant (IEEE Trans. Biomed. Eng., 2011)

A Statistical Model for Quantification and Prediction of Cardiac Remodelling: Application to Tetralogy of Fallot. - Tommaso Mansi; Ingmar Voigt; Benedetta Leonardi; Xavier Pennec; Stanley Durrleman; Maxime Sermesant; Herve Delingette; Andrew Mayall Taylor; Younes Boudjemline; Giacomo Pongiglione; Nicholas Ayache (IEEE Trans. Medical Imaging, 2011)

Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. - Keelin Murphy; Bram van Ginneken; Joseph M. Reinhardt; Sven Kabus; Kai Ding 003; Xiang Deng; Kunlin Cao; Kaifang Du; Gary E. Christensen; Vincent Garcia; Tom Vercauteren; Nicholas Ayache; et al. (IEEE Trans. Medical Imaging, 2011)

Spectral Demons - Image Registration via Global Spectral Correspondence. - Herve Lombaert; Leo J. Grady; Xavier Pennec; Nicholas Ayache; Farida Cheriet (ECCV (2), 2012)

Certifying and Reasoning on Cost Annotations in C Programs. - Nicholas Ayache; Roberto M. Amadio; Yann Régis-Gianas (FMICS, 2012)

Integration of different cardiac electrophysiological models into a single simulation pipeline. - Oscar Camara 001; Maxime Sermesant; Pablo Lamata; Linwei Wang; Mihaela Pop; Jatin Relan; Mathieu De Craene; Hervé Delingette; Huafeng Liu 003; Steven A. Niederer; Ali Pashaei; Gernot Plank; et al. (ISBI, 2012)

Clinical applications of image fusion for electrophysiology procedures. - Kawal S. Rhode; YingLiang Ma; Richard James Housden; Rashed Karim; C. Aldo Rinaldi; Michael Cooklin; Jaswinder S. Gill; Mark D. O'Neill; Tobias Schaeffter; Jatin Relan; Maxime Sermesant; Herve Delingette; et al. (ISBI, 2012)

Current-Based 4D Shape Analysis for the Mechanical Personalization of Heart Models. - Loïc Le Folgoc; Hervé Delingette; Antonio Criminisi; Nicholas Ayache (MCV, 2012)

Brain Tumor Cell Density Estimation from Multi-modal MR Images Based on a Synthetic Tumor Growth Model. - Ezequiel Geremia; Bjoern H. Menze; Marcel Prastawa; Marc-André Weber; Antonio Criminisi; Nicholas Ayache (MCV, 2012)

Groupwise Spectral Log-Demons Framework for Atlas Construction. - Herve Lombaert; Leo J. Grady; Xavier Pennec; Jean-Marc Peyrat; Nicholas Ayache; Farida Cheriet (MCV, 2012)

Regional Flux Analysis of Longitudinal Atrophy in Alzheimer's Disease. - Marco Lorenzi; Nicholas Ayache; Xavier Pennec (MICCAI (1), 2012)

Cardiac Mechanical Parameter Calibration Based on the Unscented Transform. - Stéphanie Marchesseau; Hervé Delingette; Maxime Sermesant; Kawal S. Rhode; Simon G. Duckett; C. Aldo Rinaldi; Reza Razavi; Nicholas Ayache (MICCAI (2), 2012)

In vivo Contact EP Data and ex vivo MR-Based Computer Models: Registration and Model-Dependent Errors. - Mihaela Pop; Maxime Sermesant; Roey Flor; Charles Pierre; Tommaso Mansi; Samuel O. Oduneye; Jennifer Barry; Yves Coudière; Eugene Crystal; Nicholas Ayache; Graham A. Wright (STACOM, 2012)

Predicting the Location of Glioma Recurrence after a Resection Surgery. - Erin Stretton; Emmanuel Mandonnet; Ezequiel Geremia; Bjoern H. Menze; Hervé Delingette; Nicholas Ayache (STIA, 2012)

Strain-Based Regional Nonlinear Cardiac Material Properties Estimation from Medical Images. - Ken C. L. Wong; Jatin Relan; Linwei Wang; Maxime Sermesant; Hervé Delingette; Nicholas Ayache; Pengcheng Shi (MICCAI (1), 2012)

Construction of 3D MR image-based computer models of pathologic hearts, augmented with histology and optical fluorescence imaging to characterize action potential propagation. - Mihaela Pop; Maxime Sermesant; Garry Liu; Jatin Relan; Tommaso Mansi; Alan Soong; Jean-Marc Peyrat; Michael V. Truong; Paul Fefer; Elliot R. McVeigh; Herve Delingette; Alexander Dick; et al. (Medical Image Anal., 2012)

Patient-specific electromechanical models of the heart for the prediction of pacing acute effects in CRT: A preliminary clinical validation. - Maxime Sermesant; Radomír Chabiniok; Phani Chinchapatnam; Tommaso Mansi; Florence Billet; Philippe Moireau; Jean-Marc Peyrat; K. Wong; Jatin Relan; Kawal S. Rhode; Matthew Ginks; Pier Lambiase; et al. (Medical Image Anal., 2012)

Personalization of Cardiac Motion and Contractility From Images Using Variational Data Assimilation. - Herve Delingette; Florence Billet; Ken C. L. Wong; Maxime Sermesant; Kawal S. Rhode; Matthew Ginks; C. Aldo Rinaldi; Reza Razavi; Nicholas Ayache (IEEE Trans. Biomed. Eng., 2012)

Learning Semantic and Visual Similarity for Endomicroscopy Video Retrieval. - Barbara André; Tom Vercauteren; Anna M. Buchner; Michael B. Wallace; Nicholas Ayache (IEEE Trans. Medical Imaging, 2012)

Human Atlas of the Cardiac Fiber Architecture: Study on a Healthy Population. - Herve Lombaert; Jean-Marc Peyrat; Pierre Croisille; Stanislas Rapacchi; Laurent Fanton; Farida Cheriet; Patrick Clarysse; Isabelle E. Magnin; Hervé Delingette; Nicholas Ayache (IEEE Trans. Medical Imaging, 2012)

Certified Complexity (CerCo). - Roberto M. Amadio; Nicholas Ayache; François Bobot; Jaap Boender; Brian Campbell 001; Ilias Garnier; Antoine Madet; James McKinna; Dominic P. Mulligan; Mauro Piccolo; Randy Pollack; Yann Régis-Gianas; et al. (FOPARA, 2013)

Image-based motion detection in 4D images and application to respiratory motion suppression. - Marine Breuilly; Grégoire Malandain; Nicholas Ayache; Julien Guglielmi; Thierry Pourcher; Philippe R. Franken; Jacques Darcourt (ISBI, 2013)

Spatially Adaptive Random Forests. - Ezequiel Geremia; Bjoern H. Menze; Nicholas Ayache (ISBI, 2013)

Importance of patient DTI's to accurately model glioma growth using the reaction diffusion equation. - Erin Stretton; Ezequiel Geremia; Bjoern H. Menze; Hervé Delingette; Nicholas Ayache (ISBI, 2013)

Lattice Boltzmann Method for Fast Patient-Specific Simulation of Liver Tumor Ablation from CT Images. - Chloé Audigier; Tommaso Mansi; Hervé Delingette; Saikiran Rapaka; Viorel Mihalef; Puneet Sharma; Daniel Carnegie; Emad Boctor; Michael A. Choti; Ali Kamen; Dorin Comaniciu; Nicholas Ayache (MICCAI (3), 2013)

Bayesian Atlas Estimation for the Variability Analysis of Shape Complexes. - Pietro Gori; Olivier Colliot; Yulia Worbe; Linda Marrakchi-Kacem; Sophie Lecomte; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (MICCAI (1), 2013)

Improving DTI Resolution from a Single Clinical Acquisition: A Statistical Approach Using Spatial Prior. - Vikash Gupta; Nicholas Ayache; Xavier Pennec (MICCAI (3), 2013)

Sparse Scale-Space Decomposition of Volume Changes in Deformations Fields. - Marco Lorenzi; Bjoern H. Menze; Marc Niethammer; Nicholas Ayache; Xavier Pennec (MICCAI (2), 2013)

Decision Forests for Segmentation of the Left Atrium from 3D MRI. - Ján Margeta; Kristin McLeod; Antonio Criminisi; Nicholas Ayache (STACOM, 2013)

Progress on Customization of Predictive MRI-Based Macroscopic Models from Experimental Data. - Mihaela Pop; Maxime Sermesant; Samuel O. Oduneye; Sudip Ghate; Labonny Biswas; Roey Flor; Susan Newbigging; Eugene Crystal; Nicholas Ayache; Graham A. Wright (STACOM, 2013)

Inter-operative Trajectory Registration for Endoluminal Video Synchronization: Application to Biopsy Site Re-localization. - Anant Suraj Vemuri; Stéphane Nicolau; Nicholas Ayache; Jacques Marescaux; Luc Soler (MICCAI (1), 2013)

Velocity-Based Cardiac Contractility Personalization with Derivative-Free Optimization. - Ken C. L. Wong; Maxime Sermesant; Jatin Relan; Kawal S. Rhode; Matthew Ginks; C. Aldo Rinaldi; Reza Razavi; Hervé Delingette; Nicholas Ayache (STACOM, 2013)

Tumor growth parameters estimation and source localization from a unique time point: Application to low-grade gliomas. - Islem Rekik; Stéphanie Allassonnière; Olivier Clatz; Ezequiel Geremia; Erin Stretton; Hervé Delingette; Nicholas Ayache (Comput. Vis. Image Underst., 2013)

Toward a Comprehensive Framework for the Spatiotemporal Statistical Analysis of Longitudinal Shape Data. - Stanley Durrleman; Xavier Pennec; Alain Trouvé; José Braga; Guido Gerig; Nicholas Ayache (Int. J. Comput. Vis., 2013)

Understanding the mechanisms amenable to CRT response: from pre-operative multimodal image data to patient-specific computational models. - Catalina Tobon-Gomez; Nicolas Duchateau; Rafael Sebastián; Stéphanie Marchesseau; Oscar Camara 001; Erwan Donal; Mathieu De Craene; Ali Pashaei; Jatin Relan; M. Steghofer; Pablo Lamata; Hervé Delingette; et al. (Medical Biol. Eng. Comput., 2013)

Personalized cardiac modeling and simulations in euHeart. - Jürgen Weese; Nicholas Ayache; Nicolas Smith (Medical Biol. Eng. Comput., 2013)

Personalization of a cardiac electromechanical model using reduced order unscented Kalman filtering from regional volumes. - Stéphanie Marchesseau; Hervé Delingette; Maxime Sermesant; Rocío Cabrera Lozoya; Catalina Tobon-Gomez; Philippe Moireau; Rosa M. Figueras i Ventura; Karim Lekadir; Alfredo Hernández 001; Mireille Garreau; Erwan Donal; Christophe Leclercq; et al. (Medical Image Anal., 2013)

LCC-Demons: A robust and accurate symmetric diffeomorphic registration algorithm. - Marco Lorenzi; Nicholas Ayache; Giovanni B. Frisoni; Xavier Pennec (NeuroImage, 2013)

Guest Editorial Special Issue on Medical Imaging and Image Computing in Computational Physiology. - Alejandro F. Frangi; Rod D. Hose; Peter J. Hunter; Nicholas Ayache; Dana H. Brooks (IEEE Trans. Medical Imaging, 2013)

Generation of Synthetic but Visually Realistic Time Series of Cardiac Images Combining a Biophysical Model and Clinical Images. - Adityo Prakosa; Maxime Sermesant; Hervé Delingette; Stéphanie Marchesseau; Eric Saloux; Pascal Allain; Nicolas Villain; Nicholas Ayache (IEEE Trans. Medical Imaging, 2013)

Parameter Estimation for Personalization of Liver Tumor Radiofrequency Ablation. - Chloé Audigier; Tommaso Mansi; Hervé Delingette; Saikiran Rapaka; Viorel Mihalef; Daniel Carnegie; Emad Boctor; Michael A. Choti; Ali Kamen; Dorin Comaniciu; Nicholas Ayache (ABDI@MICCAI, 2014)

Sparse Bayesian Registration. - Loïc Le Folgoc; Hervé Delingette; Antonio Criminisi; Nicholas Ayache (MICCAI (1), 2014)

A Prototype Representation to Approximate White Matter Bundles with Weighted Currents. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Fabrizio de Vico Fallani; Mario Chavez; Sophie Lecomte; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (MICCAI (3), 2014)

A Biophysical Model of Shape Changes due to Atrophy in the Brain with Alzheimer's Disease. - Bishesh Khanal; Marco Lorenzi; Nicholas Ayache; Xavier Pennec (MICCAI (2), 2014)

Laplacian Forests: Semantic Image Segmentation by Guided Bagging. - Herve Lombaert; Darko Zikic; Antonio Criminisi; Nicholas Ayache (MICCAI (2), 2014)

Confidence-Based Training for Clinical Data Uncertainty in Image-Based Prediction of Cardiac Ablation Targets. - Rocío Cabrera Lozoya; Ján Margeta; Loïc Le Folgoc; Yuki Komatsu; Benjamin Berte; Jatin Relan; Hubert Cochet; Michel Haïssaguerre; Pierre Jaïs; Nicholas Ayache; Maxime Sermesant (MCV, 2014)

Semi-automated Query Construction for Content-Based Endomicroscopy Video Retrieval. - Marzieh Kohandani Tafreshi; Nicolas Linard; Barbara André; Nicholas Ayache; Tom Vercauteren (MICCAI (1), 2014)

Recognizing Cardiac Magnetic Resonance Acquisition Planes. - Ján Margeta; Antonio Criminisi; Daniel C. Lee 002; Nicholas Ayache (MIUA, 2014)

Spectral Log-Demons: Diffeomorphic Image Registration with Very Large Deformations. - Herve Lombaert; Leo J. Grady; Xavier Pennec; Nicholas Ayache; Farida Cheriet (Int. J. Comput. Vis., 2014)

A collaborative resource to build consensus for automated left ventricular segmentation of cardiac MR images. - Avan Suinesiaputra; Brett R. Cowan; Ahmed O. Al-Agamy; Mustafa A. Elattar; Nicholas Ayache; Ahmed S. Fahmy; Ayman M. Khalifa; Pau Medrano-Gracia; Marie-Pierre Jolly; Alan H. Kadish; Daniel C. Lee 002; Ján Margeta; et al. (Medical Image Anal., 2014)

Cardiac Electrophysiological Activation Pattern Estimation From Images Using a Patient-Specific Database of Synthetic Image Sequences. - Adityo Prakosa; Maxime Sermesant; Pascal Allain; Nicolas Villain; C. Aldo Rinaldi; Kawal S. Rhode; Reza Razavi; Herve Delingette; Nicholas Ayache (IEEE Trans. Biomed. Eng., 2014)

Propagation of Myocardial Fibre Architecture Uncertainty on Electromechanical Model Parameter Estimation: A Case Study. - Roch Molléro; Dominik Neumann; Marc-Michel Rohé; Manasi Datar; Hervé Lombaert; Nicholas Ayache; Dorin Comaniciu; Olivier Ecabert; Marcello Chinali; Gabriele Rinelli; Xavier Pennec; Maxime Sermesant; et al. (FIMH, 2015)

Joint Morphometry of Fiber Tracts and Gray Matter Structures Using Double Diffeomorphisms. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Alexandre Routier; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (IPMI, 2015)

Brain Transfer: Spectral Analysis of Cortical Surfaces and Functional Maps. - Herve Lombaert; Michael Arcaro; Nicholas Ayache (IPMI, 2015)

Myocardial Infarct Localization Using Neighbourhood Approximation Forests. - Héloïse Bleton; Ján Margeta; Hervé Lombaert; Hervé Delingette; Nicholas Ayache (STACOM@MICCAI, 2015)

Bayesian Personalization of Brain Tumor Growth Model. - Matthieu Lê; Hervé Delingette; Jayashree Kalpathy-Cramer; Elizabeth R. Gerstner; Tracy Batchelor; Jan Unkelbach; Nicholas Ayache (MICCAI (2), 2015)

GPSSI: Gaussian Process for Sampling Segmentations of Images. - Matthieu Lê; Jan Unkelbach; Nicholas Ayache; Hervé Delingette (MICCAI (3), 2015)

Spectral Forests: Learning of Surface Data, Application to Cortical Parcellation. - Herve Lombaert; Antonio Criminisi; Nicholas Ayache (MICCAI (1), 2015)

Motion-Aware Mosaicing for Confocal Laser Endomicroscopy. - Jessie Mahé; Nicolas Linard; Marzieh Kohandani Tafreshi; Tom Vercauteren; Nicholas Ayache; François Lacombe; Rémi Cuingnet (MICCAI (1), 2015)

Regional flux analysis for discovering and quantifying anatomical changes: An application to the brain morphometry in Alzheimer's disease. - Marco Lorenzi; Nicholas Ayache; Xavier Pennec (NeuroImage, 2015)

Efficient Lattice Boltzmann Solver for Patient-Specific Radiofrequency Ablation of Hepatic Tumors. - Chloé Audigier; Tommaso Mansi; Herve Delingette; Saikiran Rapaka; Viorel Mihalef; Daniel Carnegie; Emad Boctor; Michael A. Choti; Ali Kamen; Nicholas Ayache; Dorin Comaniciu (IEEE Trans. Medical Imaging, 2015)

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS). - Bjoern H. Menze; András Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin S. Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth R. Gerstner; et al. (IEEE Trans. Medical Imaging, 2015)

Benchmark for Algorithms Segmenting the Left Atrium From 3D CT and MRI Datasets. - Catalina Tobon-Gomez; Arjan J. Geers; Jochen Peters; Jürgen Weese; Karen Pinto; Rashed Karim; Mohammed Ammar; Abdelaziz Daoudi; Ján Margeta; Zulma L. Sandoval; Birgit Stender; Yefeng Zheng 001; et al. (IEEE Trans. Medical Imaging, 2015)

Uncertainty Quantification of Cochlear Implant Insertion from CT Images. - Thomas Demarcy; Clair Vandersteen; Charles Raffaelli; Dan Gnansia; Nicolas Guevara; Nicholas Ayache; Hervé Delingette (CLIP@MICCAI, 2016)

Novel Framework to Integrate Real-Time MR-Guided EP Data with T1 Mapping-Based Computational Heart Models. - Sebastian Ferguson; Maxime Sermesant; Samuel O. Oduneye; Sophie Giffard-Roisin; Michael V. Truong; Labonny Biswas; Nicholas Ayache; Graham A. Wright; Mihaela Pop (STACOM@MICCAI, 2016)

Estimation of Purkinje Activation from ECG: An Intermittent Left Bundle Branch Block Study. - Sophie Giffard-Roisin; Lauren Fovargue; Jessica Webb; Roch Molléro; Jack Lee; Hervé Delingette; Nicholas Ayache; Reza Razavi; Maxime Sermesant (STACOM@MICCAI, 2016)

A Multiscale Cardiac Model for Fast Personalisation and Exploitation. - Roch Molléro; Xavier Pennec; Hervé Delingette; Nicholas Ayache; Maxime Sermesant (MICCAI (3), 2016)

Automatic View-Point Selection for Inter-Operative Endoscopic Surveillance. - Anant Suraj Vemuri; Stéphane A. Nicolau; Jacques Marescaux; Luc Soler; Nicholas Ayache (CoRR, 2016)

Sampling image segmentations for uncertainty quantification. - Matthieu Lê; Jan Unkelbach; Nicholas Ayache; Hervé Delingette (Medical Image Anal., 2016)

A biophysical model of brain deformation to simulate and analyze longitudinal MRIs of patients with Alzheimer's disease. - Bishesh Khanal; Marco Lorenzi; Nicholas Ayache; Xavier Pennec (NeuroImage, 2016)

Interoperative Biopsy Site Relocalization in Endoluminal Surgery. - Anant Suraj Vemuri; Stéphane Nicolau; Adrien Sportes; Jacques Marescaux; Luc Soler; Nicholas Ayache (IEEE Trans. Biomed. Eng., 2016)

A Patch-Based Approach for the Segmentation of Pathologies: Application to Glioma Labelling. - Nicolas Cordier; Herve Delingette; Nicholas Ayache (IEEE Trans. Medical Imaging, 2016)

Extended Modality Propagation: Image Synthesis of Pathological Cases. - Nicolas Cordier; Herve Delingette; Matthieu Lê; Nicholas Ayache (IEEE Trans. Medical Imaging, 2016)

Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Fabrizio de Vico Fallani; Mario Chavez; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (IEEE Trans. Medical Imaging, 2016)

MRI Based Bayesian Personalization of a Tumor Growth Model. - Matthieu Lê; Hervé Delingette; Jayashree Kalpathy-Cramer; Elizabeth R. Gerstner; Tracy Batchelor; Jan Unkelbach; Nicholas Ayache (IEEE Trans. Medical Imaging, 2016)

A Generative Probabilistic Model and Discriminative Extensions for Brain Lesion Segmentation - With Application to Tumor and Stroke. - Bjoern H. Menze; Koen Van Leemput; Danial Lashkari; Tammy Riklin-Raviv; Ezequiel Geremia; Esther Alberts; Philipp Gruber; Susanne Wegener; Marc-André Weber; Gábor Székely; Nicholas Ayache; Polina Golland (IEEE Trans. Medical Imaging, 2016)

Foreword. - Nicholas Ayache (Deep Learning for Medical Image Analysis, 2017)

Sparse Bayesian Non-linear Regression for Multiple Onsets Estimation in Non-invasive Cardiac Electrophysiology. - Sophie Giffard-Roisin; Hervé Delingette; Thomas Jackson; Lauren Fovargue; Jack Lee; C. Aldo Rinaldi; Nicholas Ayache; Reza Razavi; Maxime Sermesant (FIMH, 2017)

Longitudinal Parameter Estimation in 3D Electromechanical Models: Application to Cardiovascular Changes in Digestion. - Roch Molléro; Jakob A. Hauser; Xavier Pennec; Manasi Datar; Hervé Delingette; Alexander Jones; Nicholas Ayache; Tobias Heimann; Maxime Sermesant (FIMH, 2017)

Robust Non-rigid Registration Through Agent-Based Action Learning. - Julian Krebs; Tommaso Mansi; Hervé Delingette; Li Zhang; Florin C. Ghesu; Shun Miao; Andreas K. Maier; Nicholas Ayache; Rui Liao; Ali Kamen (MICCAI (1), 2017)

Longitudinal Analysis Using Personalised 3D Cardiac Models with Population-Based Priors: Application to Paediatric Cardiomyopathies. - Roch Molléro; Hervé Delingette; Manasi Datar; Tobias Heimann; Jakob A. Hauser; Dilveer Panesar; Alexander Jones; Andrew Mayall Taylor; Marcus Kelm; Titus Kühne; Marcello Chinali; Gabriele Rinelli; et al. (MICCAI (2), 2017)

Comprehensive preclinical evaluation of a multi-physics model of liver tumor radiofrequency ablation. - Chloé Audigier; Tommaso Mansi; Hervé Delingette; Saikiran Rapaka; Tiziano Passerini; Viorel Mihalef; Marie-Pierre Jolly; Raoul Pop; Michele Diana; Luc Soler; Ali Kamen; Dorin Comaniciu; et al. (Int. J. Comput. Assist. Radiol. Surg., 2017)

Fine-tuned convolutional neural nets for cardiac MRI acquisition plane recognition. - Ján Margeta; Antonio Criminisi; Rocío Cabrera Lozoya; Daniel C. Lee 002; Nicholas Ayache (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2017)

Automated analysis of human cochlea shape variability from segmented μCT images. - Thomas Demarcy; Clair Vandersteen; Nicolas Guevara; Charles Raffaelli; Dan Gnansia; Nicholas Ayache; Hervé Delingette (Comput. Medical Imaging Graph., 2017)

ECG imaging of ventricular tachycardia: evaluation against simultaneous non-contact mapping and CMR-derived grey zone. - Walther H. W. Schulze; Zhong Chen; Jatin Relan; Danila Potyagaylo; Martin W. Krueger; Rashed Karim; Manav Sohal; Anoop Shetty; YingLiang Ma; Nicholas Ayache; Maxime Sermesant; Herve Delingette; et al. (Medical Biol. Eng. Comput., 2017)

Sparse Bayesian registration of medical images for self-tuning of parameters and spatially adaptive parametrization of displacements. - Loïc Le Folgoc; Hervé Delingette; Antonio Criminisi; Nicholas Ayache (Medical Image Anal., 2017)

A Bayesian framework for joint morphometry of surface and curve meshes in multi-object complexes. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (Medical Image Anal., 2017)

Noninvasive Personalization of a Cardiac Electrophysiology Model From Body Surface Potential Mapping. - Sophie Giffard-Roisin; Thomas Jackson; Lauren Fovargue; Jack Lee; Herve Delingette; Reza Razavi; Nicholas Ayache; Maxime Sermesant (IEEE Trans. Biomed. Eng., 2017)

Image-Based Biophysical Simulation of Intracardiac Abnormal Ventricular Electrograms. - Rocío Cabrera Lozoya; Benjamin Berte; Hubert Cochet; Pierre Jaïs; Nicholas Ayache; Maxime Sermesant (IEEE Trans. Biomed. Eng., 2017)

Quantifying Registration Uncertainty With Sparse Bayesian Modelling. - Loïc Le Folgoc; Hervé Delingette; Antonio Criminisi; Nicholas Ayache (IEEE Trans. Medical Imaging, 2017)

Personalized Radiotherapy Planning Based on a Computational Tumor Growth Model. - Matthieu Lê; Hervé Delingette; Jayashree Kalpathy-Cramer; Elizabeth R. Gerstner; Tracy Batchelor; Jan Unkelbach; Nicholas Ayache (IEEE Trans. Medical Imaging, 2017)

Multi-channel Stochastic Variational Inference for the Joint Analysis of Heterogeneous Biomedical Data in Alzheimer's Disease. - Luigi Antelmi; Nicholas Ayache; Philippe Robert; Marco Lorenzi (MLCN/DLF/iMIMIC@MICCAI, 2018)

Unsupervised Probabilistic Deformation Modeling for Robust Diffeomorphic Registration. - Julian Krebs; Tommaso Mansi; Boris Mailhé; Nicholas Ayache; Hervé Delingette (DLMIA/ML-CDS@MICCAI, 2018)

Alzheimer's Disease Modelling and Staging Through Independent Gaussian Process Analysis of Spatio-Temporal Brain Changes. - Clément Abi Nader; Nicholas Ayache; Philippe Robert; Marco Lorenzi (MLCN/DLF/iMIMIC@MICCAI, 2018)

Learning Myelin Content in Multiple Sclerosis from Multimodal MRI Through Adversarial Training. - Wen Wei 001; Emilie Poirion; Benedetta Bodini; Stanley Durrleman; Nicholas Ayache; Bruno Stankoff; Olivier Colliot (MICCAI (3), 2018)

3D Consistent Biventricular Myocardial Segmentation Using Deep Learning for Mesh Generation. - Qiao Zheng; Hervé Delingette; Nicolas Duchateau; Nicholas Ayache (CoRR, 2018)

Learning Structured Deformations using Diffeomorphic Registration. - Julian Krebs; Tommaso Mansi; Boris Mailhé; Nicholas Ayache; Hervé Delingette (CoRR, 2018)

3D Consistent & Robust Segmentation of Cardiac Images by Deep Learning with Spatial Propagation. - Qiao Zheng; Hervé Delingette; Nicolas Duchateau; Nicholas Ayache (CoRR, 2018)

Deep Learning with Mixed Supervision for Brain Tumor Segmentation. - Pawel Mlynarski; Hervé Delingette; Antonio Criminisi; Nicholas Ayache (CoRR, 2018)

Model-Based Generation of Large Databases of Cardiac Images: Synthesis of Pathological Cine MR Sequences From Real Healthy Cases. - Nicolas Duchateau; Maxime Sermesant; Herve Delingette; Nicholas Ayache (IEEE Trans. Medical Imaging, 2018)

Double Diffeomorphism: Combining Morphometry and Structural Connectivity Analysis. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Alexandre Routier; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (IEEE Trans. Medical Imaging, 2018)

3-D Consistent and Robust Segmentation of Cardiac Images by Deep Learning With Spatial Propagation. - Qiao Zheng; Herve Delingette; Nicolas Duchateau; Nicholas Ayache (IEEE Trans. Medical Imaging, 2018)

Sparse Multi-Channel Variational Autoencoder for the Joint Analysis of Heterogeneous Data. - Luigi Antelmi; Nicholas Ayache; Philippe Robert; Marco Lorenzi (ICML, 2019)

Probabilistic Motion Modeling from Medical Image Sequences: Application to Cardiac Cine-MRI. - Julian Krebs; Tommaso Mansi; Nicholas Ayache; Hervé Delingette (STACOM@MICCAI, 2019)

3D convolutional neural networks for tumor segmentation using long-range 2D context. - Pawel Mlynarski; Hervé Delingette; Antonio Criminisi; Nicholas Ayache (Comput. Medical Imaging Graph., 2019)

Unsupervised shape and motion analysis of 3822 cardiac 4D MRIs of UK Biobank. - Qiao Zheng; Hervé Delingette; Kenneth Fung; Steffen E. Petersen; Nicholas Ayache (CoRR, 2019)

Monotonic Gaussian Process for Spatio-Temporal Trajectory Separation in Brain Imaging Data. - Clément Abi Nader; Nicholas Ayache; Philippe Robert; Marco Lorenzi (CoRR, 2019)

Anatomically Consistent Segmentation of Organs at Risk in MRI with Convolutional Neural Networks. - Pawel Mlynarski; Hervé Delingette; Hamza Alghamdi; Pierre-Yves Bondiau; Nicholas Ayache (CoRR, 2019)

The Digital Health Revolution - Introduction to the Special Theme. - Sara Colantonio; Nicholas Ayache (ERCIM News, 2019)

Radiomics: How to Make Medical Images Speak? - Fanny Orlhac; Charles Bouveyron; Nicholas Ayache (ERCIM News, 2019)

Predicting PET-derived demyelination from multimodal MRI using sketcher-refiner adversarial training for multiple sclerosis. - Wen Wei 001; Emilie Poirion; Benedetta Bodini; Stanley Durrleman; Nicholas Ayache; Bruno Stankoff; Olivier Colliot (Medical Image Anal., 2019)

Explainable cardiac pathology classification on cine MRI with motion characterization by semi-supervised learning of apparent flow. - Qiao Zheng; Hervé Delingette; Nicholas Ayache (Medical Image Anal., 2019)

A model of brain morphological changes related to aging and Alzheimer's disease from cross-sectional assessments. - Raphaël Sivera; Hervé Delingette; Marco Lorenzi; Xavier Pennec; Nicholas Ayache (NeuroImage, 2019)

Transfer Learning From Simulations on a Reference Anatomy for ECGI in Personalized Cardiac Resynchronization Therapy. - Sophie Giffard-Roisin; Herve Delingette; Thomas Jackson; Jessica Webb; Lauren Fovargue; Jack Lee; Christopher A. Rinaldi; Reza Razavi; Nicholas Ayache; Maxime Sermesant (IEEE Trans. Biomed. Eng., 2019)

Model-Based Feature Augmentation for Cardiac Ablation Target Learning From Images. - Rocío Cabrera Lozoya; Benjamin Berte; Hubert Cochet; Pierre Jaïs; Nicholas Ayache; Maxime Sermesant (IEEE Trans. Biomed. Eng., 2019)

Learning a Probabilistic Model for Diffeomorphic Registration. - Julian Krebs; Hervé Delingette; Boris Mailhé; Nicholas Ayache; Tommaso Mansi (IEEE Trans. Medical Imaging, 2019)

Monotonic Gaussian Process for spatio-temporal disease progression modeling in brain imaging data. - Clément Abi Nader; Nicholas Ayache; Philippe Robert; Marco Lorenzi; Alzheimer's Disease Neuroimaging Initiative (NeuroImage, 2020)

Predicting PET-derived myelin content from multisequence MRI for individual longitudinal analysis in multiple sclerosis. - Wen Wei 001; Emilie Poirion; Benedetta Bodini; Matteo Tonietto; Stanley Durrleman; Olivier Colliot; Bruno Stankoff; Nicholas Ayache (NeuroImage, 2020)

Biomedical Imaging and Analysis in the Age of Big Data and Deep Learning. - James S. Duncan; Michael F. Insana; Nicholas Ayache (Proc. IEEE, 2020)

Attention-based Multiple Instance Learning with Mixed Supervision on the Camelyon16 Dataset. - Paul Tourniaire; Marius Ilie; Paul Hofman; Nicholas Ayache; Herve Delingette (COMPAY@MICCAI, 2021)

Combining Bayesian And Deep Learning Methods For The Delineation Of The Fan In Ultrasound Images. - Hind Dadoun; Hervé Delingette; Anne-Laure Rousseau; Eric de Kerviler; Nicholas Ayache (ISBI, 2021)

Deep reinforcement learning in medical imaging: A literature review. - S. Kevin Zhou; T. Hoang Ngan Le; Khoa Luu; Hien Van Nguyen; Nicholas Ayache (Medical Image Anal., 2021)

Learning a Generative Motion Model From Image Sequences Based on a Latent Motion Matrix. - Julian Krebs; Hervé Delingette; Nicholas Ayache; Tommaso Mansi (IEEE Trans. Medical Imaging, 2021)

MOrphologically-Aware Jaccard-Based ITerative Optimization (MOJITO) for Consensus Segmentation. - Dimitri Hamzaoui; Sarah Montagne; Raphaële Renard-Penna; Nicholas Ayache; Hervé Delingette (UNSURE@MICCAI, 2022)

Data Stealing Attack on Medical Images: Is It Safe to Export Networks from Data Lakes? - Huiyu Li; Nicholas Ayache; Hervé Delingette (DeCaF/FAIR@MICCAI, 2022)

Joint Representation Learning from French Radiological Reports and Ultrasound Images. - Hind Dadoun; Hervé Delingette; Anne-Laure Rousseau; Eric de Kerviler; Nicholas Ayache (ISBI, 2023)

Anatomical Landmark Detection for Initializing US and MR Image Registration. - Zhijie Fang; Hervé Delingette; Nicholas Ayache (ASMUS@MICCAI, 2023)

Morphologically-Aware Consensus Computation via Heuristics-based IterATive Optimization (MACCHIatO). - Dimitri Hamzaoui; Sarah Montagne; Raphaële Renard-Penna; Nicholas Ayache; Hervé Delingette (CoRR, 2023)

Comparison of physics-based deformable registration methods for image-guided neurosurgery. - Nikos Chrisochoides; Yixun Liu; Fotis Drakopoulos; Andriy Kot; Panagiotis A. Foteinos; Christos Tsolakis; Emmanuel Billias; Olivier Clatz; Nicholas Ayache; Andrey Fedorov; Alexandra J. Golby; Peter M. Black; et al. (Frontiers Digit. Health, 2023)

MS-CLAM: Mixed supervision for the classification and localization of tumors in Whole Slide Images. - Paul Tourniaire; Marius Ilie; Paul Hofman; Nicholas Ayache; Hervé Delingette (Medical Image Anal., 2023)

Generative Medical Image Anonymization Based on Latent Code Projection and Optimization. - Huiyu Li; Nicholas Ayache; Hervé Delingette (ISBI, 2025)

Spatial regularisation for improved accuracy and interpretability in keypoint-based registration. - Benjamin Billot; Ramya Muthukrishnan; Esra Abaci Turk; Patricia Ellen Grant; Nicholas Ayache; Hervé Delingette; Polina Golland (CoRR, 2025)