Amino acid?base interactions: a three-dimensional analysis of protein?DNA interactions at an atomic level. - Nicholas M. Luscombe; Roman A. Laskowski; Janet M. Thornton (Nucleic Acids Res., 2001)

Prediction of regulatory networks: genome-wide identification of transcription factor targets from gene expression data. - Jiang Qian; C. Jimmy Lin; Nicholas M. Luscombe; Haiyuan Yu; Mark Gerstein (Bioinform., 2003)

ExpressYourself: a modular platform for processing and visualizing microarray data - Nicholas M. Luscombe; Thomas E. Royce; Paul Bertone; Nathaniel Echols; Christine E. Horak; Joseph T. Chang; Michael Snyder 001; Mark Gerstein (Nucleic Acids Res., 2003)

Transcription regulation: a genomic network. - Nicholas M. Luscombe (BMC Bioinform., 2005)

Development of the Research Data Archive at OIST. - Matthew R. Leyden; Nicholas M. Luscombe; Milind Purohit (BDA (Astronomy, Science, and Engineering), 2021)