Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species. - Manolis Kamvysselis; Nick Patterson; Bruce Birren; Bonnie Berger; Eric S. Lander (RECOMB, 2003)

Methods in Comparative Genomics: Genome Correspondence, Gene Identification and Regulatory Motif Discovery. - Manolis Kellis; Nick Patterson; Bruce Birren; Bonnie Berger; Eric S. Lander (J. Comput. Biol., 2004)

Analysis of case-control association studies with known risk variants. - Noah Zaitlen; Bogdan Pasaniuc; Nick Patterson; Samuela Pollack; Benjamin Voight; Leif Groop; David Altshuler; Brian E. Henderson; Laurence N. Kolonel; Loic Le Marchand; Kevin Waters; Christopher A. Haiman; et al. (Bioinform., 2012)

Fast and accurate imputation of summary statistics enhances evidence of functional enrichment. - Bogdan Pasaniuc; Noah Zaitlen; Huwenbo Shi; Gaurav Bhatia; Alexander Gusev; Joseph Pickrell; Joel Hirschhorn; David P. Strachan; Nick Patterson; Alkes L. Price (Bioinform., 2014)

miqoGraph: fitting admixture graphs using mixed-integer quadratic optimization. - Julia Yan; Nick Patterson; Vagheesh Narasimhan (Bioinform., 2021)