Evaluation of scanning capacitance microscopy sample preparation by focused ion beam. - Nicolas Rodriguez 001; Jérôme Adrian; Catherine Grosjean; Gérald Haller; Christophe Girardeaux; Alain Portavoce (Microelectron. Reliab., 2006)

PANDIT: an evolution-centric database of protein and associated nucleotide domains with inferred trees. - Simon Whelan; Paul I. W. de Bakker; Emmanuel Quevillon; Nicolas Rodriguez 001; Nick Goldman (Nucleic Acids Res., 2006)

SBMLeditor: effective creation of models in the Systems Biology Markup Language (SBML). - Nicolas Rodriguez 001; Marco Donizelli; Nicolas Le Novère (BMC Bioinform., 2007)

Investigation of a new method for dopant characterization. - Jérôme Adrian; Nicolas Rodriguez 001; Fabien Essely; Gérald Haller; Catherine Grosjean; Alain Portavoce; Christophe Girardeaux (Microelectron. Reliab., 2007)

Data Integration and Semantic Enrichment of Systems Biology Models and Simulations. - Vijayalakshmi Chelliah; Lukas Endler; Nick S. Juty; Camille Laibe; Chen Li 011; Nicolas Rodriguez 001; Nicolas Le Novère (DILS, 2009)

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. - Chen Li 011; Marco Donizelli; Nicolas Rodriguez 001; Harish Dharuri; Lukas Endler; Vijayalakshmi Chelliah; Lu Li 002; Enuo He; Arnaud Henry; Melanie I. Stefan; Jacky L. Snoep; Michael Hucka; et al. (BMC Syst. Biol., 2010)

JSBML: a flexible Java library for working with SBML. - Andreas Dräger; Nicolas Rodriguez 001; Marine Dumousseau; Alexander Dörr; Clemens Wrzodek; Nicolas Le Novère; Andreas Zell; Michael Hucka (Bioinform., 2011)

Qualitative translation of relations from BioPAX to SBML qual. - Finja Büchel; Clemens Wrzodek; Florian Mittag; Andreas Dräger; Johannes Eichner; Nicolas Rodriguez 001; Nicolas Le Novère; Andreas Zell (Bioinform., 2012)

MELTING, a flexible platform to predict the melting temperatures of nucleic acids. - Marine Dumousseau; Nicolas Rodriguez 001; Nick S. Juty; Nicolas Le Novère (BMC Bioinform., 2012)

Path2Models: large-scale generation of computational models from biochemical pathway maps. - Finja Büchel; Nicolas Rodriguez 001; Neil Swainston; Clemens Wrzodek; Tobias Czauderna; Roland Keller; Florian Mittag; Michael Schubert; Mihai Glont; Martin Golebiewski; Martijn P. van Iersel; Sarah M. Keating; et al. (BMC Syst. Biol., 2013)

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools. - Claudine Chaouiya; Duncan Bérenguier; Sarah M. Keating; Aurélien Naldi; Martijn P. van Iersel; Nicolas Rodriguez 001; Andreas Dräger; Finja Büchel; Thomas Cokelaer; Bryan M. Kowal; Benjamin Wicks; Emanuel J. V. Gonçalves; et al. (BMC Syst. Biol., 2013)

The systems biology simulation core algorithm. - Roland Keller; Alexander Dörr; Akito Tabira; Akira Funahashi; Michael J. Ziller; Richard R. Adams; Nicolas Rodriguez 001; Nicolas Le Novère; Noriko Hiroi; Hannes Planatscher; Andreas Zell; Andreas Dräger (BMC Syst. Biol., 2013)

COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project. - Frank T. Bergmann; Richard R. Adams; Stuart L. Moodie; Jonathan Cooper; Mihai Glont; Martin Golebiewski; Michael Hucka; Camille Laibe; Andrew K. Miller; David P. Nickerson; Brett G. Olivier; Nicolas Rodriguez 001; et al. (BMC Bioinform., 2014)

COMBINE archive: One File To Share Them All. - Frank T. Bergmann; Richard Adams; Stuart L. Moodie; Jonathan Cooper; Mihai Glont; Martin Golebiewski; Michael Hucka; Camille Laibe; Andrew K. Miller; David P. Nickerson; Brett G. Olivier; Nicolas Rodriguez 001; et al. (CoRR, 2014)

JSBML 1.0: providing a smorgasbord of options to encode systems biology models. - Nicolas Rodriguez 001; Alex Thomas; Leandro H. Watanabe; Ibrahim Y. Vazirabad; Victor Kofia; Harold F. Gómez; Florian Mittag; Jakob Matthes; Jan Rudolph; Finja Wrzodek; Eugen Netz; Alexander Diamantikos; et al. (Bioinform., 2015)

COMBINE Archive Specification Version 1. - Frank T. Bergmann; Nicolas Rodriguez 001; Nicolas Le Novère (J. Integr. Bioinform., 2015)

BioModels: ten-year anniversary. - Vijayalakshmi Chelliah; Nick S. Juty; Ishan Ajmera; Raza Ali; Marine Dumousseau; Mihai Glont; Michael Hucka; Gaël Jalowicki; Sarah M. Keating; Vincent Knight-Schrijver; Audald Lloret-Villas; Kedar Nath Natarajan; et al. (Nucleic Acids Res., 2015)

The systems biology format converter. - Nicolas Rodriguez 001; Jean-Baptiste Pettit; Piero Dalle Pezze; Lu Li 002; Arnaud Henry; Martijn P. van Iersel; Gaël Jalowicki; Martina Kutmon; Kedar Nath Natarajan; David Tolnay; Melanie I. Stefan; Chris T. A. Evelo; et al. (BMC Bioinform., 2016)

BioModels: expanding horizons to include more modelling approaches and formats. - Mihai Glont; Tung V. N. Nguyen; Martin Graesslin; Robert Hälke; Raza Ali; Jochen Schramm; Sarala M. Wimalaratne; Varun B. Kothamachu; Nicolas Rodriguez 001; Maciej J. Swat; Jurgen Eils; Roland Eils; et al. (Nucleic Acids Res., 2018)

Systems biology markup language (SBML) level 3 package: multistate, multicomponent and multicompartment species, version 1, release 2. - Fengkai Zhang; Lucian P. Smith; Michael L. Blinov; James R. Faeder; William S. Hlavacek; José Juan Tapia; Sarah M. Keating; Nicolas Rodriguez 001; Andreas Dräger; Leonard A. Harris; Andrew Finney; Bin Hu 025; et al. (J. Integr. Bioinform., 2020)

BioModels - 15 years of sharing computational models in life science. - Rahuman S. Malik-Sheriff; Mihai Glont; Tung V. N. Nguyen; Krishan K. Tiwari; Matthew G. Roberts; Ashley Xavier; Manh T. Vu; Jinghao Men; Matthieu Maire; Sarubini Kananathan; Emma L. Fairbanks; Johannes P. Meyer; et al. (Nucleic Acids Res., 2020)