VAMP: Visualization and analysis of array-CGH, transcriptome and other molecular profiles. - Philippe La Rosa; Eric Viara; Philippe Hupé; Gaëlle Pierron; Stéphane Liva; Pierre Neuvial; Isabel Brito 002; Séverine Lair; Nicolas Servant; Nicolas Robine; Elodie Manié; Caroline Brennetot; et al. (Bioinform., 2006)

Goulphar: rapid access and expertise for standard two-color microarray normalization methods. - Sophie Lemoine; Florence Combes; Nicolas Servant; Stéphane Le Crom (BMC Bioinform., 2006)

ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data. - Chong-Jian Chen; Nicolas Servant; Joern Toedling; Alexis Sarazin; Antonin Marchais; Evelyne Duvernois-Berthet; Valérie Cognat; Vincent Colot; Olivier Voinnet; Edith Heard; Constance Ciaudo; Emmanuel Barillot (Bioinform., 2012)

HiTC: exploration of high-throughput 'C' experiments. - Nicolas Servant; Bryan R. Lajoie; Elphège P. Nora; Luca Giorgetti; Chong-Jian Chen; Edith Heard; Job Dekker; Emmanuel Barillot (Bioinform., 2012)

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis. - Marie-Agnès Dillies; Andrea Rau; Julie Aubert; Christelle Hennequet-Antier; Marine Jeanmougin; Nicolas Servant; Céline Keime; Guillemette Marot; David Castel; Jordi Estelle; Gregory Guernec; Bernd Jagla; et al. (Briefings Bioinform., 2013)

Multi-factor data normalization enables the detection of copy number aberrations in amplicon sequencing data. - Valentina Boeva; Tatiana G. Popova; Maxime Lienard; Sebastien Toffoli; Maud Kamal; Christophe Le Tourneau; David Gentien; Nicolas Servant; Pierre Gestraud; Thomas Rio Frio; Philippe Hupé; Emmanuel Barillot; et al. (Bioinform., 2014)

Effective normalization for copy number variation in Hi-C data. - Nicolas Servant; Nelle Varoquaux; Edith Heard; Emmanuel Barillot; Jean-Philippe Vert (BMC Bioinform., 2018)

iced: fast and memory efficient normalization of contact maps. - Nelle Varoquaux; Nicolas Servant (J. Open Source Softw., 2019)

TREMSUCS-TCGA - an integrated workflow for the identification of biomarkers for treatment success. - Gábor Balogh; Natasha Jorge; Célia Dupain; Maud Kamal; Nicolas Servant; Christophe Le Tourneau; Peter F. Stadler; Stephan H. Bernhart (J. Integr. Bioinform., 2024)