sourceR: Classification and source attribution of infectious agents among heterogeneous populations. - Poppy Miller; Jonathan C. Marshall; Nigel French; Chris P. Jewell (PLoS Comput. Biol., 2017)

Genome-by-genome approach for fast bacterial genealogical relationship evaluation. - Ji Zhang 026; Yanwen Xiong; Lynn Rogers; Glen P. Carter; Nigel French (Bioinform., 2018)

Out of (the) bag - encoding categorical predictors impacts out-of-bag samples. - Helen L. Smith; Patrick J. Biggs; Nigel French; Adam N. H. Smith; Jonathan C. Marshall (PeerJ Comput. Sci., 2024)

A mathematical, classical stratification modeling approach to disentangling the impact of weather on infectious diseases: A case study using spatio-temporally disaggregated Campylobacter surveillance data for England and Wales. - Giovanni Lo Iacono; Alasdair J. C. Cook; Gianne Derks; Lora E. Fleming; Nigel French; Emma L. Gillingham; Laura C. Gonzalez Villeta; Clare Heaviside; Roberto La Ragione; Giovanni Leonardi; Christophe E. Sarran; Sotiris Vardoulakis; et al. (PLoS Comput. Biol., 2024)

Lost in the Forest: Encoding categorical variables and the absent levels problem. - Helen L. Smith; Patrick J. Biggs; Nigel French; Adam N. H. Smith; Jonathan C. Marshall (Data Min. Knowl. Discov., 2024)