BoBER: web interface to the base of bioisosterically exchangeable replacements. - Samo Lesnik; Blaz Skrlj; Nika Erzen; Urban Bren; Stanislav Gobec; Janez Konc; Dusanka Janezic (J. Cheminformatics, 2017)

GenProBiS: web server for mapping of sequence variants to protein binding sites. - Janez Konc; Blaz Skrlj; Nika Erzen; Tanja Kunej; Dusanka Janezic (Nucleic Acids Res., 2017)

AttViz: Online exploration of self-attention for transparent neural language modeling. - Blaz Skrlj; Nika Erzen; Shane Sheehan; Saturnino Luz; Marko Robnik-Sikonja; Senja Pollak (CoRR, 2020)

Prioritization of COVID-19-Related Literature via Unsupervised Keyphrase Extraction and Document Representation Learning. - Blaz Skrlj; Marko Jukic; Nika Erzen; Senja Pollak; Nada Lavrac (DS, 2021)

Exploring Neural Language Models via Analysis of Local and Global Self-Attention Spaces. - Blaz Skrlj; Shane Sheehan; Nika Erzen; Marko Robnik-Sikonja; Saturnino Luz; Senja Pollak (EACL (Hackashop), 2021)

CaNDis: a web server for investigation of causal relationships between diseases, drugs and drug targets. - Blaz Skrlj; Nika Erzen; Nada Lavrac; Tanja Kunej; Janez Konc (Bioinform., 2021)