Efficient Critical Path Identification Based on Viability Analysis Method Considering Process Variations. - Sheis Abolma'ali; Nika Mansouri-Ghiasi; Mehdi Kamal; Ali Afzali-Kusha; Massoud Pedram (IEEE Trans. Very Large Scale Integr. Syst., 2017)

FLIN: Enabling Fairness and Enhancing Performance in Modern NVMe Solid State Drives. - Arash Tavakkol; Mohammad Sadrosadati; Saugata Ghose; Jeremie S. Kim; Yixin Luo; Yaohua Wang; Nika Mansouri-Ghiasi; Lois Orosa 001; Juan Gómez-Luna; Onur Mutlu (ISCA, 2018)

Reducing DRAM Latency via Charge-Level-Aware Look-Ahead Partial Restoration. - Yaohua Wang; Arash Tavakkol; Lois Orosa 001; Saugata Ghose; Nika Mansouri-Ghiasi; Minesh Patel; Jeremie S. Kim; Hasan Hassan; Mohammad Sadrosadati; Onur Mutlu (MICRO, 2018)

CROW: a low-cost substrate for improving DRAM performance, energy efficiency, and reliability. - Hasan Hassan; Minesh Patel; Jeremie S. Kim; Abdullah Giray Yaglikçi; Nandita Vijaykumar; Nika Mansouri-Ghiasi; Saugata Ghose; Onur Mutlu (ISCA, 2019)

SMASH: Co-designing Software Compression and Hardware-Accelerated Indexing for Efficient Sparse Matrix Operations. - Konstantinos Kanellopoulos; Nandita Vijaykumar; Christina Giannoula; Roknoddin Azizi; Skanda Koppula; Nika Mansouri-Ghiasi; Taha Shahroodi; Juan Gómez-Luna; Onur Mutlu (MICRO, 2019)

Dataplant: In-DRAM Security Mechanisms for Low-Cost Devices. - Lois Orosa 001; Yaohua Wang; Ivan Puddu; Mohammad Sadrosadati; Kaveh Razavi; Juan Gómez-Luna; Hasan Hassan; Nika Mansouri-Ghiasi; Arash Tavakkol; Minesh Patel; Jeremie S. Kim; Vivek Seshadri; et al. (CoRR, 2019)

FIGARO: Improving System Performance via Fine-Grained In-DRAM Data Relocation and Caching. - Yaohua Wang; Lois Orosa 001; Xiangjun Peng; Yang Guo 003; Saugata Ghose; Minesh Patel; Jeremie S. Kim; Juan Gómez-Luna; Mohammad Sadrosadati; Nika Mansouri-Ghiasi; Onur Mutlu (MICRO, 2020)

SIMDRAM: a framework for bit-serial SIMD processing using DRAM. - Nastaran Hajinazar; Geraldo F. Oliveira; Sven Gregorio; João Dinis Ferreira; Nika Mansouri-Ghiasi; Minesh Patel; Mohammed Alser; Saugata Ghose; Juan Gómez-Luna; Onur Mutlu (ASPLOS, 2021)

CODIC: A Low-Cost Substrate for Enabling Custom In-DRAM Functionalities and Optimizations. - Lois Orosa 001; Yaohua Wang; Mohammad Sadrosadati; Jeremie S. Kim; Minesh Patel; Ivan Puddu; Haocong Luo; Kaveh Razavi; Juan Gómez-Luna; Hasan Hassan; Nika Mansouri-Ghiasi; Saugata Ghose; et al. (ISCA, 2021)

SIMDRAM: An End-to-End Framework for Bit-Serial SIMD Computing in DRAM. - Nastaran Hajinazar; Geraldo F. Oliveira; Sven Gregorio; João Dinis Ferreira; Nika Mansouri-Ghiasi; Minesh Patel; Mohammed Alser; Saugata Ghose; Juan Gómez-Luna; Onur Mutlu (CoRR, 2021)

GenStore: a high-performance in-storage processing system for genome sequence analysis. - Nika Mansouri-Ghiasi; Jisung Park 001; Harun Mustafa; Jeremie S. Kim; Ataberk Olgun; Arvid Gollwitzer; Damla Senol Cali; Can Firtina; Haiyu Mao; Nour Almadhoun Alserr; Rachata Ausavarungnirun; Nandita Vijaykumar; et al. (ASPLOS, 2022)

SeGraM: a universal hardware accelerator for genomic sequence-to-graph and sequence-to-sequence mapping. - Damla Senol Cali; Konstantinos Kanellopoulos; Joël Lindegger; Zülal Bingöl; Gurpreet S. Kalsi; Ziyi Zuo; Can Firtina; Meryem Banu Cavlak; Jeremie S. Kim; Nika Mansouri-Ghiasi; Gagandeep Singh 002; Juan Gómez-Luna; et al. (ISCA, 2022)

GenStore: In-Storage Filtering of Genomic Data for High-Performance and Energy-Efficient Genome Analysis. - Nika Mansouri-Ghiasi; Jisung Park 001; Harun Mustafa; Jeremie S. Kim; Ataberk Olgun; Arvid Gollwitzer; Damla Senol Cali; Can Firtina; Haiyu Mao; Nour Almadhoun Alserr; Rachata Ausavarungnirun; Nandita Vijaykumar; et al. (ISVLSI, 2022)

GenStore: A High-Performance and Energy-Efficient In-Storage Computing System for Genome Sequence Analysis. - Nika Mansouri-Ghiasi; Jisung Park 001; Harun Mustafa; Jeremie S. Kim; Ataberk Olgun; Arvid Gollwitzer; Damla Senol Cali; Can Firtina; Haiyu Mao; Nour Almadhoun Alserr; Rachata Ausavarungnirun; Nandita Vijaykumar; et al. (CoRR, 2022)

RevaMp3D: Architecting the Processor Core and Cache Hierarchy for Systems with Monolithically-Integrated Logic and Memory. - Nika Mansouri-Ghiasi; Mohammad Sadrosadati; Geraldo F. Oliveira; Konstantinos Kanellopoulos; Rachata Ausavarungnirun; Juan Gómez-Luna; Aditya Manglik; João Dinis Ferreira; Jeremie S. Kim; Christina Giannoula; Nandita Vijaykumar; Jisung Park 001; et al. (CoRR, 2022)

Accelerating Time Series Analysis via Processing using Non-Volatile Memories. - Ivan Fernandez; Aditya Manglik; Christina Giannoula; Ricardo Quislant; Nika Mansouri-Ghiasi; Juan Gómez-Luna; Eladio Gutiérrez; Oscar G. Plata; Onur Mutlu (CoRR, 2022)

TuRaN: True Random Number Generation Using Supply Voltage Underscaling in SRAMs. - Ismail Emir Yüksel; Ataberk Olgun; Behzad Salami 001; F. Nisa Bostanci; Yahya Can Tugrul; Abdullah Giray Yaglikçi; Nika Mansouri-Ghiasi; Onur Mutlu; Oguz Ergin (CoRR, 2022)

TargetCall: Eliminating the Wasted Computation in Basecalling via Pre-Basecalling Filtering. - Meryem Banu Cavlak; Gagandeep Singh 002; Mohammed Alser; Can Firtina; Joël Lindegger; Mohammad Sadrosadati; Nika Mansouri-Ghiasi; Can Alkan; Onur Mutlu (CoRR, 2022)

Venice: Improving Solid-State Drive Parallelism at Low Cost via Conflict-Free Accesses. - Rakesh Nadig; Mohammad Sadrosadati; Haiyu Mao; Nika Mansouri-Ghiasi; Arash Tavakkol; Jisung Park 001; Hamid Sarbazi-Azad; Juan Gómez-Luna; Onur Mutlu (ISCA, 2023)

RawHash: enabling fast and accurate real-time analysis of raw nanopore signals for large genomes. - Can Firtina; Nika Mansouri-Ghiasi; Joël Lindegger; Gagandeep Singh 002; Meryem Banu Cavlak; Haiyu Mao; Onur Mutlu (Bioinform., 2023)

MetaStore: High-Performance Metagenomic Analysis via In-Storage Computing. - Nika Mansouri-Ghiasi; Mohammad Sadrosadati; Harun Mustafa; Arvid Gollwitzer; Can Firtina; Julien Eudine; Haiyu Mao; Joël Lindegger; Meryem Banu Cavlak; Mohammed Alser; Jisung Park 001; Onur Mutlu (CoRR, 2023)

ALP: Alleviating CPU-Memory Data Movement Overheads in Memory-Centric Systems. - Nika Mansouri-Ghiasi; Nandita Vijaykumar; Geraldo F. Oliveira; Lois Orosa 001; Ivan Fernandez; Mohammad Sadrosadati; Konstantinos Kanellopoulos; Nastaran Hajinazar; Juan Gómez-Luna; Onur Mutlu (IEEE Trans. Emerg. Top. Comput., 2023)

Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICs. - Joël Lindegger; Damla Senol Cali; Mohammed Alser; Juan Gómez-Luna; Nika Mansouri-Ghiasi; Onur Mutlu (Bioinform., 2023)

MegIS: High-Performance, Energy-Efficient, and Low-Cost Metagenomic Analysis with In-Storage Processing. - Nika Mansouri-Ghiasi; Mohammad Sadrosadati; Harun Mustafa; Arvid Gollwitzer; Can Firtina; Julien Eudine; Haiyu Mao; Joël Lindegger; Meryem Banu Cavlak; Mohammed Alser; Jisung Park 001; Onur Mutlu (ISCA, 2024)

MATSA: An MRAM-Based Energy-Efficient Accelerator for Time Series Analysis. - Ivan Fernandez; Christina Giannoula; Aditya Manglik; Ricardo Quislant; Nika Mansouri-Ghiasi; Juan Gómez-Luna; Eladio Gutiérrez; Oscar G. Plata; Onur Mutlu (IEEE Access, 2024)

RawAlign: Accurate, Fast, and Scalable Raw Nanopore Signal Mapping via Combining Seeding and Alignment. - Joël Lindegger; Can Firtina; Nika Mansouri-Ghiasi; Mohammad Sadrosadati; Mohammed Alser; Onur Mutlu (IEEE Access, 2024)

Label-guided seed-chain-extend alignment on annotated De Bruijn graphs. - Harun Mustafa; Mikhail Karasikov; Nika Mansouri-Ghiasi; Gunnar Rätsch; André Kahles (Bioinform., 2024)

Amplifying Main Memory-Based Timing Covert and Side Channels using Processing-in-Memory Operations. - Konstantinos Kanellopoulos; F. Nisa Bostanci; Ataberk Olgun; Abdullah Giray Yaglikçi; Ismail Emir Yuksel; Nika Mansouri-Ghiasi; Zülal Bingöl; Mohammad Sadrosadati; Onur Mutlu (CoRR, 2024)

Revisiting Main Memory-Based Covert and Side Channel Attacks in the Context of Processing-in-Memory. - F. Nisa Bostanci; Konstantinos Kanellopoulos; Ataberk Olgun; A. Giray Yaglikçi; Ismail Emir Yüksel; Nika Mansouri-Ghiasi; Zülal Bingöl; Mohammad Sadrosadati; Onur Mutlu (DSN, 2025)

Ariadne: A Hotness-Aware and Size-Adaptive Compressed Swap Technique for Fast Application Relaunch and Reduced CPU Usage on Mobile Devices. - Yu Liang 004; Aofeng Shen; Chun Jason Xue; Riwei Pan; Haiyu Mao; Nika Mansouri-Ghiasi; Qingcai Jiang; Rakesh Nadig; Lei Li; Rachata Ausavarungnirun; Mohammad Sadrosadati; Onur Mutlu (HPCA, 2025)

REIS: A High-Performance and Energy-Efficient Retrieval System with In-Storage Processing. - Kangqi Chen; Rakesh Nadig; Manos Frouzakis; Nika Mansouri-Ghiasi; Yu Liang 004; Haiyu Mao; Jisung Park 001; Mohammad Sadrosadati; Onur Mutlu (ISCA, 2025)

SAGe: A Lightweight Algorithm-Architecture Co-Design for Mitigating the Data Preparation Bottleneck in Large-Scale Genome Analysis. - Nika Mansouri-Ghiasi; Talu Güloglu; Harun Mustafa; Can Firtina; Konstantina Koliogeorgi; Konstantinos Kanellopoulos; Haiyu Mao; Rakesh Nadig; Mohammad Sadrosadati; Jisung Park 001; Onur Mutlu (CoRR, 2025)

MARS: Processing-In-Memory Acceleration of Raw Signal Genome Analysis Inside the Storage Subsystem. - Melina Soysal; Konstantina Koliogeorgi; Can Firtina; Nika Mansouri-Ghiasi; Rakesh Nadig; Haiyu Mao; Geraldo F. Oliveira; Yu Liang 004; Klea Zambaku; Mohammad Sadrosadati; Onur Mutlu (CoRR, 2025)

REIS: A High-Performance and Energy-Efficient Retrieval System with In-Storage Processing. - Kangqi Chen; Andreas Kosmas Kakolyris; Rakesh Nadig; Manos Frouzakis; Nika Mansouri-Ghiasi; Yu Liang 004; Haiyu Mao; Jisung Park 001; Mohammad Sadrosadati; Onur Mutlu (CoRR, 2025)