Resonance graphs of fullerenes. - Niko Tratnik; Petra Zigert Pletersek (Ars Math. Contemp., 2016)

The Szeged index and the Wiener index of partial cubes with applications to chemical graphs. - Matevz Crepnjak; Niko Tratnik (Appl. Math. Comput., 2017)

Saturation number of nanotubes. - Niko Tratnik; Petra Zigert Pletersek (Ars Math. Contemp., 2017)

On the Steiner hyper-Wiener index of a graph. - Niko Tratnik (Appl. Math. Comput., 2018)

Saturation number of lattice animals. - Niko Tratnik; Tomislav Doslic; Petra Zigert Pletersek (Ars Math. Contemp., 2018)

Uniquely identifying the edges of a graph: The edge metric dimension. - Aleksander Kelenc; Niko Tratnik; Ismael González Yero (Discret. Appl. Math., 2018)

Resonance graphs of catacondensed even ring systems. - Simon Brezovnik; Niko Tratnik; Petra Zigert Pletersek (Appl. Math. Comput., 2020)

Generalized cut method for computing the edge-Wiener index. - Niko Tratnik (Discret. Appl. Math., 2020)

Szeged-like entropies of graphs. - Matthias Dehmer; Frank Emmert-Streib; Niko Tratnik; Petra Zigert Pletersek (Appl. Math. Comput., 2022)

The generalized Zhang-Zhang polynomial of benzenoid systems - theory and applications. - Boris Furtula; Slavko Radenkovic; Izudin Redzepovic; Niko Tratnik; Petra Zigert Pletersek (Appl. Math. Comput., 2022)

Szeged and Mostar root-indices of graphs. - Simon Brezovnik; Matthias Dehmer; Niko Tratnik; Petra Zigert Pletersek (Appl. Math. Comput., 2023)

Resonance Graphs on Perfect Matchings of Graphs on Surfaces. - Niko Tratnik; Dong Ye 002 (Graphs Comb., 2023)

The Multivariable Zhang-Zhang Polynomial of Phenylenes. - Niko Tratnik (Axioms, 2023)

Outerplane bipartite graphs with isomorphic resonance graphs. - Simon Brezovnik; Zhongyuan Che; Niko Tratnik; Petra Zigert Pletersek (Discret. Appl. Math., 2024)

Resonance graphs of plane bipartite graphs as daisy cubes. - Simon Brezovnik; Zhongyuan Che; Niko Tratnik; Petra Zigert Pletersek (Discret. Appl. Math., 2025)

On the Wiener-like root-indices of graphs. - Simon Brezovnik; Matthias Dehmer; Niko Tratnik; Petra Zigert Pletersek (Comput. Appl. Math., 2025)