Pathway studio - the analysis and navigation of molecular networks. - Alexander Nikitin; Sergei Egorov; Nikolai Daraselia; Ilya Mazo (Bioinform., 2003)

MedScan, a natural language processing engine for MEDLINE abstracts. - Svetlana Novichkova; Sergei Egorov; Nikolai Daraselia (Bioinform., 2003)

Extracting human protein interactions from MEDLINE using a full-sentence parser. - Nikolai Daraselia; Anton Yuryev; Sergei Egorov; Svetlana Novichkova; Alexander Nikitin; Ilya Mazo (Bioinform., 2004)

Research Paper: A Simple and Practical Dictionary-based Approach for Identification of Proteins in Medline Abstracts. - Sergei Egorov; Anton Yuryev; Nikolai Daraselia (J. Am. Medical Informatics Assoc., 2004)

Identifying Local Gene Expression Patterns in Biomolecular Networks. - Andrey Y. Sivachenko; Anton Yuryev; Nikolai Daraselia; Ilya Mazo (CSB Workshops, 2005)

Automatic pathway building in biological association networks. - Anton Yuryev; Zufar Mulyukov; Ekaterina Kotelnikova; Sergei Maslov; Sergei Egorov; Alexander Nikitin; Nikolai Daraselia; Ilya Mazo (BMC Bioinform., 2006)

Automatic extraction of gene ontology annotation and its correlation with clusters in protein networks. - Nikolai Daraselia; Anton Yuryev; Sergei Egorov; Ilya Mazo; Iaroslav Ispolatov (BMC Bioinform., 2007)

Molecular Networks in microarray Analysis. - Andrey Y. Sivachenko; Anton Yuryev; Nikolai Daraselia; Ilya Mazo (J. Bioinform. Comput. Biol., 2007)

Computational Approaches for Drug Repositioning and Combination Therapy Design. - Ekaterina Kotelnikova; Anton Yuryev; Ilya Mazo; Nikolai Daraselia (J. Bioinform. Comput. Biol., 2010)

Novel Approach to Meta-Analysis of Microarray Datasets Reveals Muscle Remodeling-related Drug Targets and Biomarkers in Duchenne Muscular Dystrophy. - Ekaterina Kotelnikova; Maria A. Shkrob; Mikhail A. Pyatnitskiy; Alessandra Ferlini; Nikolai Daraselia (PLoS Comput. Biol., 2012)