Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo. - Nikolaus Rajewsky; Massimo Vergassola; Ulrike Gaul; Eric D. Siggia (BMC Bioinform., 2002)

SMASHing regulatory sites in DNA by human. - Mihaela Zavolan; Nicholas D. Socci; Nikolaus Rajewsky; Terry Gaasterland (CSB, 2003)

Conservation of regulatory elements between two species of Drosophila. - Eldon Emberly; Nikolaus Rajewsky; Eric D. Siggia (BMC Bioinform., 2003)

microRNA Target Predictions across Seven Drosophila Species and Comparison to Mammalian Targets. - Dominic Grün; Yi-Lu Wang; David Langenberger; Kristin C. Gunsalus; Nikolaus Rajewsky (PLoS Comput. Biol., 2005)

Identifying MicroRNAs and their Targets. - Nikolaus Rajewsky (German Conference on Bioinformatics, 2007)

Session Introduction. - Doron Betel; Christina S. Leslie; Nikolaus Rajewsky (Pacific Symposium on Biocomputing, 2008)

doRiNA: a database of RNA interactions in post-transcriptional regulation. - Gerd Anders; Sebastian D. Mackowiak; Marvin Jens; Jonas Maaskola; Andreas Kuntzagk; Nikolaus Rajewsky; Markus Landthaler; Christoph Dieterich (Nucleic Acids Res., 2012)

DoRiNA 2.0 - upgrading the doRiNA database of RNA interactions in post-transcriptional regulation. - Kai Blin; Christoph Dieterich; Ricardo Wurmus; Nikolaus Rajewsky; Markus Landthaler; Altuna Akalin (Nucleic Acids Res., 2015)

Gene expression cartography. - Mor Nitzan; Nikos Karaiskos; Nir Friedman; Nikolaus Rajewsky (Nat., 2019)