AQUA: an Advanced QUery Architecture for the SPARC Portal. - Niloofar Shahidi; Xuanzhi Lin; Yuda Munarko; Laila Rasmy; Tram Ngo (F1000Research, 2021)

Hierarchical semantic composition of biosimulation models using bond graphs. - Niloofar Shahidi; Michael Pan; Soroush Safaei; Kenneth Tran; Edmund J. Crampin; David P. Nickerson (PLoS Comput. Biol., 2021)