A test for comparing two groups of samples when analyzing multiple omics profiles. - Nimisha Chaturvedi; Jelle J. Goeman; Judith M. Boer; Wessel N. van Wieringen; Renée X. de Menezes (BMC Bioinform., 2014)

The Characteristics of Heterozygous Protein Truncating Variants in the Human Genome. - István Bartha; Antonio Rausell; Paul J. McLaren; Pejman Mohammadi 001; Manuel Tardaguila; Nimisha Chaturvedi; Jacques Fellay; Amalio Telenti (PLoS Comput. Biol., 2015)

Sequence Alignment Through the Looking Glass. - Raja Appuswamy; Jacques Fellay; Nimisha Chaturvedi (IPDPS Workshops, 2018)

Accel-Align: a fast sequence mapper and aligner based on the seed-embed-extend method. - Yiqing Yan; Nimisha Chaturvedi; Raja Appuswamy (BMC Bioinform., 2021)

Optimizing the Accuracy of Randomized Embedding for Sequence Alignment. - Yiqing Yan; Nimisha Chaturvedi; Raja Appuswamy (IPDPS Workshops, 2022)