Pepitope: epitope mapping from affinity-selected peptides. - Itay Mayrose; Osnat Penn; Elana Erez; Nimrod D. Rubinstein; Tomer Shlomi; Natalia Tarnovitski Freund; Erez M. Bublil; Eytan Ruppin; Roded Sharan; Jonathan M. Gershoni; Eric Martz; Tal Pupko (Bioinform., 2007)

Evolutionary Modeling of Rate Shifts Reveals Specificity Determinants in HIV-1 Subtypes. - Osnat Penn; Adi Stern; Nimrod D. Rubinstein; Julien Dutheil; Eran Bacharach; Nicolas Galtier; Tal Pupko (PLoS Comput. Biol., 2008)

Epitopia: a web-server for predicting B-cell epitopes. - Nimrod D. Rubinstein; Itay Mayrose; Eric Martz; Tal Pupko (BMC Bioinform., 2009)