UPerfsonarUI - a Standalone Graphical User Interface for Querying perfSONAR Services. - Nina Jeliazkova; Luchesar Iliev; Vedrin Jeliazkov (John Vincent Atanasoff Symposium, 2006)

Collaborative development of predictive toxicology applications. - Barry J. Hardy; Nicki Douglas; Christoph Helma; Micha Rautenberg; Nina Jeliazkova; Vedrin Jeliazkov; Ivelina Nikolova; Romualdo Benigni; Olga Tcheremenskaia; Stefan Kramer 001; Tobias Girschick; Fabian Buchwald; et al. (J. Cheminformatics, 2010)

AMBIT RESTful web services: an implementation of the OpenTox application programming interface. - Nina Jeliazkova; Vedrin Jeliazkov (J. Cheminformatics, 2011)

Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on. - Noel M. O'Boyle; Rajarshi Guha; Egon L. Willighagen; Sam E. Adams; Jonathan Alvarsson; Jean-Claude Bradley; Igor V. Filippov; Robert M. Hanson; Marcus D. Hanwell; Geoffrey R. Hutchison; Craig A. James; Nina Jeliazkova; et al. (J. Cheminformatics, 2011)

OpenTox predictive toxicology framework: toxicological ontology and semantic media wiki-based OpenToxipedia. - Olga Tcheremenskaia; Romualdo Benigni; Ivelina Nikolova; Nina Jeliazkova; Sylvia Escher; Monika Batke; Thomas Baier 005; Vladimir Poroikov; Alexey Lagunin; Micha Rautenberg; Barry J. Hardy (J. Biomed. Semant., 2012)

The first eNanoMapper prototype: A substance database to support safe-by-design. - Nina Jeliazkova; Philip Doganis; Bengt Fadeel; Roland Grafstrom; Janna Hastings; Vedrin Jeliazkov; Pekka Kohonen; Cristian R. Munteanu; Haralambos Sarimveis; Bart Smeets; Georgia Tsiliki; David Vorgrimmler; et al. (BIBM, 2014)

eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment. - Janna Hastings; Nina Jeliazkova; Gareth I. Owen; Georgia Tsiliki; Cristian R. Munteanu; Christoph Steinbeck; Egon L. Willighagen (J. Biomed. Semant., 2015)

Answering Scientific Questions with linked European Nanosafety Data. - Egon L. Willighagen; Micha Rautenberg; Denis Gebele; Linda Rieswijk; Friederike Ehrhart; Jiakang Chang; Georgios Drakakis; Penny Nymark; Pekka Kohonen; Gareth I. Owen; Haralambos Sarimveis; Christoph Helma; et al. (SWAT4LS, 2016)

XMetDB: an open access database for xenobiotic metabolism. - Ola Spjuth; Patrik Rydberg; Egon L. Willighagen; Chris T. A. Evelo; Nina Jeliazkova (J. Cheminformatics, 2016)

ExCAPE-DB: an integrated large scale dataset facilitating Big Data analysis in chemogenomics. - Jiangming Sun; Nina Jeliazkova; Vladimir I. Chupakhin; José Felipe Golib Dzib; Ola Engkvist; Lars Carlsson; Jörg K. Wegner; Hugo Ceulemans; Ivan Georgiev; Vedrin Jeliazkov; Nikolay T. Kochev; Thomas J. Ashby; et al. (J. Cheminformatics, 2017)

Erratum to: ExCAPE-DB: an integrated large scale dataset facilitating Big Data analysis in chemogenomics. - Jiangming Sun; Nina Jeliazkova; Vladimir I. Chupakhin; José Felipe Golib Dzib; Ola Engkvist; Lars Carlsson; Jörg K. Wegner; Hugo Ceulemans; Ivan Georgiev; Vedrin Jeliazkov; Nikolay T. Kochev; Thomas J. Ashby; et al. (J. Cheminformatics, 2017)

The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. - Egon L. Willighagen; John W. Mayfield; Jonathan Alvarsson; Arvid Berg; Lars Carlsson; Nina Jeliazkova; Stefan Kuhn 001; Tomás Pluskal; Miquel Rojas-Chertó; Ola Spjuth; Gilleain M. Torrance; Chris T. A. Evelo; et al. (J. Cheminformatics, 2017)

Erratum to: The Chemistry Development Kit (CDK) v2.0: atom typing, depiction, molecular formulas, and substructure searching. - Egon L. Willighagen; John W. Mayfield; Jonathan Alvarsson; Arvid Berg; Lars Carlsson; Nina Jeliazkova; Stefan Kuhn 001; Tomás Pluskal; Miquel Rojas-Chertó; Ola Spjuth; Gilleain M. Torrance; Chris T. A. Evelo; et al. (J. Cheminformatics, 2017)

Ambit-SMIRKS: a software module for reaction representation, reaction search and structure transformation. - Nikolay T. Kochev; Svetlana Avramova; Nina Jeliazkova (J. Cheminformatics, 2018)

ExCAPE-DB: An Integrated Large Scale Dataset Facilitating Big Data Analysis in Chemogenomics. - Jiangming Sun; Nina Jeliazkova; Vladimir I. Chupakhin; José Felipe Golib Dzib; Lars Carlsson; Jörg K. Wegner; Hugo Ceulemans; Ivan Georgiev; Vedrin Jeliazkov; Nikolay T. Kochev; Thomas J. Ashby; Hongming Chen 001 (BNAIC/BENELEARN, 2019)

Journal of Cheminformatics, ORCID, and GitHub. - Egon L. Willighagen; Nina Jeliazkova; Rajarshi Guha (J. Cheminformatics, 2019)

METER.AC: Live Open Access Atmospheric Monitoring Data for Bulgaria with High Spatiotemporal Resolution. - Atanas Terziyski; Stoyan Tenev; Vedrin Jeliazkov; Nina Jeliazkova; Nikolay T. Kochev (Data, 2020)

Industry-scale application and evaluation of deep learning for drug target prediction. - Noé Sturm; Andreas Mayr; Thanh Le Van; Vladimir I. Chupakhin; Hugo Ceulemans; Jörg K. Wegner; José Felipe Golib Dzib; Nina Jeliazkova; Yves Vandriessche; Stanislav Böhm; Vojtech Cima; Jan Martinovic; et al. (J. Cheminformatics, 2020)

Reply to "FAIR chemical structure in the Journal of Cheminformatics". - Rajarshi Guha; Nina Jeliazkova; Egon L. Willighagen; Barbara Zdrazil (J. Cheminformatics, 2021)

What is the role of cheminformatics in a pandemic? - Rajarshi Guha; Egon L. Willighagen; Barbara Zdrazil; Nina Jeliazkova (J. Cheminformatics, 2021)

European Registry of Materials: global, unique identifiers for (undisclosed) nanomaterials. - Jeaphianne P. M. van Rijn; Antreas Afantitis; Mustafa Culha; Maria Dusinska; Thomas E. Exner; Nina Jeliazkova; Eleonora Marta Longhin; Iseult Lynch; Georgia Melagraki; Penny Nymark; Anastasios G. Papadiamantis; David A. Winkler; et al. (J. Cheminformatics, 2022)

A look back at a pilot of the citation typing ontology. - Rajarshi Guha; Barbara Zdrazil; Nina Jeliazkova; Karina Martínez-Mayorga (J. Cheminformatics, 2023)

Improving reproducibility and reusability in the Journal of Cheminformatics. - Charles Tapley Hoyt; Barbara Zdrazil; Rajarshi Guha; Nina Jeliazkova; Karina Martínez-Mayorga; Eva Nittinger (J. Cheminformatics, 2023)

From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials. - Jeaphianne P. M. van Rijn; Marvin Martens; Ammar Ammar; Mihaela Roxana Cimpan; Valerie Fessard; Peter Hoet; Nina Jeliazkova; Sivakumar Murugadoss; Ivana Vinkovic Vrcek; Egon L. Willighagen (J. Cheminformatics, 2024)

Are new ideas harder to find? A note on incremental research and Journal of Cheminformatics' Scientific Contribution Statement. - Barbara Zdrazil; Rajarshi Guha; Karina Martínez-Mayorga; Nina Jeliazkova (J. Cheminformatics, 2024)

High-throughput screening data generation, scoring and FAIRification: a case study on nanomaterials. - Gergana Tancheva; Vesa Hongisto; Konrad Patyra; Luchesar Iliev; Nikolay T. Kochev; Penny Nymark; Pekka Kohonen; Nina Jeliazkova; Roland Grafstrom (J. Cheminformatics, 2025)