A heuristic particle swarm optimization. - Hoang Thanh Lam; Nina Nicolaevna Popova; Quan Thoi Minh Nguyen (GECCO, 2007)

Hierarchical Visualization System for High Performance Computing. - Oxana Dzhosan; Nina Popova 001; Anton Korzh (PARCO, 2009)

Automatic Performance Tuning Approach for Parallel Applications Based on Sparse Linear Solvers. - Vasiliy Yu. Voronov; Nina N. Popova (PARCO, 2009)

Challenges of a Systematic Approach to Parallel Computing and Supercomputing Education. - Vladimir V. Voevodin; Victor Gergel; Nina Popova 001 (Euro-Par Workshops, 2015)

Parallel workflow manager for non-parallel bioinformatic applications to solve large-scale biological problems on a supercomputer. - Dmitry A. Suplatov; Nina Popova 001; Sergey A. Zhumatiy; Vladimir V. Voevodin; Vytas K. Svedas (J. Bioinform. Comput. Biol., 2016)

Multidimensional Performance and Scalability Analysis for Diverse Applications Based on System Monitoring Data. - Maya G. Neytcheva; Sverker Holmgren; Jonathan R. Bull; Ali Dorostkar; Anastasia Kruchinina; Dmitry A. Nikitenko; Nina Popova 001; Pavel A. Shvets; Alexey M. Teplov; Vadim V. Voevodin; Vladimir V. Voevodin (PPAM (1), 2017)

Studying the Structure of Parallel Algorithms as a Key Element of High-Performance Computing Education. - Vladimir V. Voevodin; Alexander S. Antonov; Nina Popova 001 (Euro-Par Workshops, 2018)

Mustguseal: a server for multiple structure-guided sequence alignment of protein families. - Dmitry A. Suplatov; Kirill E. Kopylov; Nina N. Popova; Vladimir V. Voevodin; Vytas K. Svedas (Bioinform., 2018)

Computational science and HPC education for graduate students: Paving the way to exascale. - Alexander S. Antonov; Nina Popova 001; Vladimir V. Voevodin (J. Parallel Distributed Comput., 2018)

An Experimental Study of Deep Neural Networks on HPC Clusters. - Dmitry Buryak; Nina N. Popova; Vladimir V. Voevodin; Yuri Konkov; Oleg Ivanov; Denis Shaykhlislamov; Ilya D. Fateev (RuSCDays, 2019)

High-Performance Hybrid Computing for Bioinformatic Analysis of Protein Superfamilies. - Dmitry A. Suplatov; Yana A. Sharapova; Maksim V. Shegay; Nina N. Popova; Kateryna Fesko; Vladimir V. Voevodin; Vytas K. Svedas (RuSCDays, 2019)

parMATT: parallel multiple alignment of protein 3D-structures with translations and twists for distributed-memory systems. - Maksim V. Shegay; Dmitry A. Suplatov; Nina N. Popova; Vytas K. Svedas; Vladimir V. Voevodin (Bioinform., 2019)

Infrastructure of Supercomputing Technologies. - Vladimir V. Voevodin; Nina N. Popova (Program. Comput. Softw., 2019)

Tuning ANNs Hyperparameters and Neural Architecture Search Using HPC. - Kamil Khamitov; Nina Popova 001; Yuri Konkov; Tony Castillo (RuSCDays, 2020)

Co-designing HPC-systems by computing capabilities and management flexibility to accommodate bioinformatic workflows at different complexity levels. - Dmitry A. Suplatov; Maksim V. Shegay; Yana A. Sharapova; Ivan V. Timokhin; Nina Popova 001; Vladimir V. Voevodin; Vytas K. Svedas (J. Supercomput., 2021)

Guide tree optimization with genetic algorithm to improve multiple protein 3D-structure alignment. - Maksim V. Shegay; Vytas K. Svedas; Vladimir V. Voevodin; Dmitry A. Suplatov; Nina N. Popova (Bioinform., 2022)