FindSim: A Framework for Integrating Neuronal Data and Signaling Models. - Nisha A. Viswan; Gubbi Vani HarshaRani; Melanie I. Stefan; Upinder S. Bhalla (Frontiers Neuroinformatics, 2018)

Mathematical basis and toolchain for hierarchical optimization of biochemical networks. - Nisha A. Viswan; Alexandre Tribut; Manvel Gasparyan; Ovidiu Radulescu; Upinder S. Bhalla (PLoS Comput. Biol., 2024)