Modeling and Optimization for the Design of IMS Networks. - Nisha Rajagopal; Michael Devetsikiotis (Annual Simulation Symposium, 2006)

RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State. - Nisha Rajagopal; Wei Xie; Yan Li; Uli Wagner 002; Wei Wang 051; John A. Stamatoyannopoulos; Jason Ernst; Manolis Kellis; Bing Ren (PLoS Comput. Biol., 2013)

Integrative analysis of 111 reference human epigenomes Open. - Roadmap Epigenomics Consortium; Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi Moussavi; Pouya Kheradpour; ZhiZhuo Zhang; Jianrong Wang; Michael J. Ziller; Viren Amin; et al. (Nat., 2015)

Chromatin architecture reorganization during stem cell differentiation Open. - Jesse R. Dixon; Inkyung Jung; Siddarth Selvaraj; Yin Shen; Jessica E. Antosiewicz-Bourget; Ahyoung Lee; Zhen Ye; Audrey Kim; Nisha Rajagopal; Wei Xie; Yarui Diao; Jing Liang; et al. (Nat., 2015)