Integrated Genomic Island Prediction Tool (IGIPT). - Ruchi Jain; Sandeep Ramineni; Nita Parekh (ICIT, 2008)

Graph Spectral Approach for Identifying Protein Domains. - Hari Krishna Yalamanchili; Nita Parekh (BICoB, 2009)

Identifying Structural Repeats in Proteins using Graph Centrality Measures. - Hari Krishna Yalamanchili; Ruchi Jain; Nita Parekh (NaBIC, 2009)

Analysis of Centrality Measures of Airport Network of India. - Manasi Sapre; Nita Parekh (PReMI, 2011)

Relaxed Neighbor Based Graph Transformations for Effective Preprocessing: A Function Prediction Case Study. - D. Satheesh Kumar; Krishna Reddy Polepalli; Nita Parekh (BDA, 2014)

Identifying tandem Ankyrin repeats in protein structures. - Broto Chakrabarty; Nita Parekh (BMC Bioinform., 2014)

PRIGSA: Protein repeat identification by graph spectral analysis. - Broto Chakrabarty; Nita Parekh (J. Bioinform. Comput. Biol., 2014)

NAPS: Network Analysis of Protein Structures. - Broto Chakrabarty; Nita Parekh (Nucleic Acids Res., 2016)

NAPS update: network analysis of molecular dynamics data and protein-nucleic acid complexes. - Broto Chakrabarty; Varun Naganathan; Kanak Garg; Yash Agarwal; Nita Parekh (Nucleic Acids Res., 2019)

NetREx: Network-based Rice Expression Analysis Server for abiotic stress conditions. - Sanchari Sircar; Mayank Musaddi; Nita Parekh (Database J. Biol. Databases Curation, 2022)

Explainable and Lightweight Model for COVID-19 Detection Using Chest Radiology Images. - Suba S; Nita Parekh (CoRR, 2022)

Evaluating Generalizability of Deep Learning Models Using Indian-COVID-19 CT Dataset. - Suba S; Nita Parekh; Ramesh Loganathan; Vikram Pudi; Chinnababu Sunkavalli (CoRR, 2022)

DNA Methylation Based Subtype Classification of Breast Cancer. - Sri Lakshmi Bhavani Pagolu; S. Suba; Nita Parekh (ICCABS, 2023)

Lightweight and Generalizable Model for COVID-19 Detection Using Chest Xray Images. - Suba Suseela; Nita Parekh (ICCABS, 2023)

Attention-CNN Model for COVID-19 Diagnosis Using Chest CT Images. - S. Suba; Nita Parekh (PReMI, 2023)

On Achievable Rates for the Shotgun Sequencing Channel with Erasures. - Hrishi Narayanan; Prasad Krishnan; Nita Parekh (ISIT, 2024)

From pixels to prognosis: Attention-CNN model for COVID-19 diagnosis using chest CT images. - Suba Suseela; Nita Parekh (IET Image Process., 2025)