Optimal Sequence Alignment to ED-Strings. - Njagi Moses Mwaniki; Nadia Pisanti (ISBRA, 2022)

Fast Exact String to D-Texts Alignments. - Njagi Moses Mwaniki; Erik Garrison; Nadia Pisanti (BIOINFORMATICS, 2023)

Comparing Elastic-Degenerate Strings: Algorithms, Lower Bounds, and Applications. - Estéban Gabory; Njagi Moses Mwaniki; Nadia Pisanti; Solon P. Pissis; Jakub Radoszewski; Michelle Sweering; Wiktor Zuba (CPM, 2023)

Popping Bubbles in Pangenome Graphs. - Njagi Moses Mwaniki; Erik Garrison; Nadia Pisanti (CoRR, 2024)

Pangenome comparison via ED strings. - Estéban Gabory; Njagi Moses Mwaniki; Nadia Pisanti; Solon P. Pissis; Jakub Radoszewski; Michelle Sweering; Wiktor Zuba (Frontiers Bioinform., 2024)

Elastic-degenerate string comparison. - Estéban Gabory; Njagi Moses Mwaniki; Nadia Pisanti; Solon P. Pissis; Jakub Radoszewski; Michelle Sweering; Wiktor Zuba (Inf. Comput., 2025)