A LASSO-based approach to sample sites for phylogenetic tree search. - Noa Ecker; Dana Azouri; Ben Bettisworth; Alexandros Stamatakis; Yishay Mansour; Itay Mayrose; Tal Pupko (Bioinform., 2022)

Multiple sequence alignment as a sequence-to-sequence learning problem. - Edo Dotan; Yonatan Belinkov; Oren Avram; Elya Wygoda; Noa Ecker; Michael Alburquerque; Omri Keren; Gil Loewenthal; Tal Pupko (ICLR, 2023)

A machine-learning-based alternative to phylogenetic bootstrap. - Noa Ecker; Dorothée Huchon; Yishay Mansour; Itay Mayrose; Tal Pupko (Bioinform., 2024)