KEGG-Based Pathway Visualization Tool for Complex Omics Data. - Kazuharu Arakawa; Nobuaki Kono; Yohei Yamada; Hirotada Mori; Masaru Tomita (Silico Biol., 2005)

MEGU: Pathway Mapping Web-Service Based on KEGG and SVG. - Nobuaki Kono; Kazuharu Arakawa; Masaru Tomita (Silico Biol., 2006)

Restauro-G: A Rapid Genome Re-Annotation System for Comparative Genomics. - Satoshi Tamaki; Kazuharu Arakawa; Nobuaki Kono; Masaru Tomita (Genom. Proteom. Bioinform., 2007)

Genome Projector: zoomable genome map with multiple views. - Kazuharu Arakawa; Satoshi Tamaki; Nobuaki Kono; Nobuhiro Kido; Keita Ikegami; Ryu Ogawa; Masaru Tomita (BMC Bioinform., 2009)