Computational Modeling of an Epidermal Growth Factor Receptor Single-Mutation Resistance to Cetuximab in Colorectal Cancer Treatment. - Ignasi Buch; Noelia Ferruz; Gianni De Fabritiis (J. Chem. Inf. Model., 2013)

Reranking Docking Poses Using Molecular Simulations and Approximate Free Energy Methods. - Gianluigi Lauro; Noelia Ferruz; Simone Fulle; Matt J. Harvey; Paul W. Finn; Gianni De Fabritiis (J. Chem. Inf. Model., 2014)

Insights from Fragment Hit Binding Assays by Molecular Simulations. - Noelia Ferruz; Matthew J. Harvey; Jordi Mestres; Gianni De Fabritiis (J. Chem. Inf. Model., 2015)

Protlego: a Python package for the analysis and design of chimeric proteins. - Noelia Ferruz; Jakob Noske; Birte Höcker (Bioinform., 2021)

ProteinTools: a toolkit to analyze protein structures. - Noelia Ferruz; Steffen Schmidt; Birte Höcker (Nucleic Acids Res., 2021)

Controllable protein design with language models. - Noelia Ferruz; Birte Höcker (Nat. Mach. Intell., 2022)

Exploring the Protein Sequence Space with Global Generative Models. - Sergio Romero-Romero; Sebastian Lindner 005; Noelia Ferruz (CoRR, 2023)

Anniversary AI reflections. - Noelia Ferruz; Marinka Zitnik; Pierre-Yves Oudeyer; Emmie Hine; Nandana Sengupta; Yiyu Shi 001; Diana Mincu; Sebastian Porsdam Mann; Payel Das; Francesco Stella (Nat. Mac. Intell., 2024)