Clustering gene expression data with memetic algorithms based on minimum spanning trees. - Nora Speer; Peter Merz; Christian Spieth; Andreas Zell (IEEE Congress on Evolutionary Computation, 2003)

A memetic co-clustering algorithm for gene expression profiles and biological annotation. - Nora Speer; Christian Spieth; Andreas Zell (IEEE Congress on Evolutionary Computation, 2004)

Utilizing an island model for EA to preserve solution diversity for inferring gene regulatory networks. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (IEEE Congress on Evolutionary Computation, 2004)

A memetic inference method for gene regulatory networks based on S-Systems. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (IEEE Congress on Evolutionary Computation, 2004)

A memetic clustering algorithm for the functional partition of genes based on the gene ontology. - Nora Speer; Christian Spieth; Andreas Zell (CIBCB, 2004)

Iteratively Inferring Gene Regulatory Networks with Virtual Knockout Experiments. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (EvoWorkshops, 2004)

Optimizing Topology and Parameters of Gene Regulatory Network Models from Time-Series Experiments. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (GECCO (1), 2004)

Clustering-based approach to identify solutions for the inference of regulatory networks. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (Congress on Evolutionary Computation, 2005)

Functional Distances for Genes Based on GO Feature Maps and their Application to Clustering. - Nora Speer; Holger Fröhlich; Christian Spieth; Andreas Zell (CIBCB, 2005)

Predicting Single Genes Related to Immune-Relevant Processes. - Christian Spieth; Felix Streichert; Nora Speer; Christian Sinzger; Kathrin Eberhard; Andreas Zell (CIBCB, 2005)

Feedback Memetic Algorithms for Modeling Gene Regulatory Networks. - Christian Spieth; Felix Streichert; Jochen Supper; Nora Speer; Andreas Zell (CIBCB, 2005)

Multi-objective Model Optimization for Inferring Gene Regulatory Networks. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (EMO, 2005)

Inferring Regulatory Systems with Noisy Pathway Information. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (German Conference on Bioinformatics, 2005)

Identifying valid solutions for the inference of regulatory networks. - Christian Spieth; Felix Streichert; Nora Speer; Andreas Zell (GECCO, 2005)

Biological Cluster Validity Indices Based on the Gene Ontology. - Nora Speer; Christian Spieth; Andreas Zell (IDA, 2005)

Functional grouping of genes using spectral clustering and Gene Ontology. - Nora Speer; Holger Fröhlich; Christian Spieth; Andreas Zell (IJCNN, 2005)

Spectral Clustering Gene Ontology Terms to Group Genes by Function. - Nora Speer; Christian Spieth; Andreas Zell (WABI, 2005)

Kernel Based Functional Gene Grouping. - Holger Fröhlich; Nora Speer; Christian Spieth; Andreas Zell (IJCNN, 2006)

JCell - a Java-based framework for inferring regulatory networks from time series data. - Christian Spieth; Jochen Supper; Felix Streichert; Nora Speer; Andreas Zell (Bioinform., 2006)

GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products. - Holger Fröhlich; Nora Speer; Annemarie Poustka; Tim Beißbarth (BMC Bioinform., 2007)