Modeling of DNA binding to the condensin hinge domain using molecular dynamics simulations guided by atomic force microscopy. - Hiroki Koide; Noriyuki Kodera; Shveta Bisht; Shoji Takada; Tsuyoshi Terakawa (PLoS Comput. Biol., 2021)

Atom Filtering Algorithm and GPU-Accelerated Calculation of Simulation Atomic Force Microscopy Images. - Romain Amyot; Noriyuki Kodera; Holger Flechsig (Algorithms, 2024)