CoP: a database for characterizing co-expressed gene modules with biological information in plants. - Yoshiyuki Ogata; Hideyuki Suzuki; Nozomu Sakurai; Daisuke Shibata (Bioinform., 2010)

KaPPA-View4: a metabolic pathway database for representation and analysis of correlation networks of gene co-expression and metabolite co-accumulation and omics data. - Nozomu Sakurai; Takeshi Ara; Yoshiyuki Ogata; Ryosuke Sano; Takashi Ohno; Kenjiro Sugiyama; Atsushi Hiruta; Kiyoshi Yamazaki; Kentaro Yano; Koh Aoki; Asaph Aharoni; Kazuki Hamada; et al. (Nucleic Acids Res., 2011)

An application of a relational database system for high-throughput prediction of elemental compositions from accurate mass values. - Nozomu Sakurai; Takeshi Ara; Shigehiko Kanaya; Yukiko Nakamura; Yoko Iijima; Mitsuo Enomoto; Takeshi Motegi; Koh Aoki; Hideyuki Suzuki; Daisuke Shibata (Bioinform., 2013)

UC2 search: using unique connectivity of uncharged compounds for metabolite annotation by database searching in mass spectrometry-based metabolomics. - Nozomu Sakurai; Takafumi Narise; Joon-Soo Sim; Chang-Muk Lee; Chiaki Ikeda; Nayumi Akimoto; Shigehiko Kanaya (Bioinform., 2018)

The Thing Metabolome Repository family (XMRs): comparable untargeted metabolome databases for analyzing sample-specific unknown metabolites. - Nozomu Sakurai; Shinichi Yamazaki; Kunihiro Suda; Ai Hosoki; Nayumi Akimoto; Haruya Takahashi; Daisuke Shibata; Yuichi Aoki (Nucleic Acids Res., 2023)