Evaluation of GPT and BERT-based models on identifying protein-protein interactions in biomedical text. - Hasin Rehana; Nur Bengisu Çam; Mert Basmaci; Yongqun He; Arzucan Özgür; Junguk Hur (CoRR, 2023)

Nested Named Entity Recognition using Multilayer BERT-based Model. - Hasin Rehana; Benu Bansal; Nur Bengisu Çam; Jie Zheng 001; Yongqun He; Arzucan Özgür; Junguk Hur (CLEF (Working Notes), 2024)

Cancer Vaccine Adjuvant Name Recognition from Biomedical Literature using Large Language Models. - Hasin Rehana; Jie Zheng 001; Leo Yeh; Benu Bansal; Nur Bengisu Çam; Christianah Jemiyo; Brett A. McGregor; Arzucan Özgür; Yongqun He; Junguk Hur (CoRR, 2025)